3H3P	Immune System	date	Apr 16, 2009
title	Crystal Structure Of Hiv Epitope-Scaffold 4e10 Fv Complex
authors	M.A.Holmes
compound		source
Molecule: Fv 4e10 Heavy Chain Chain: H, I Engineered: Yes Mutation: Yes		Organism_scientific: Homo Sapiens Organism_taxid: 9606 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21(De3) Ril Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet22b
Molecule: Fv 4e10 Light Chain Chain: L, M Engineered: Yes		Organism_scientific: Homo Sapiens Organism_taxid: 9606 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21(De3) Ril Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet22b
Molecule: 4e10_s0_1tjlc_004_n Chain: S, T Engineered: Yes Other_details: The Author States That The Epitope-Scaffold On Transcription Factor Dksa From E. Coli (Pdb Id 1tjl).		Organism_scientific: Artificial Gene Organism_taxid: 32630 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21(De3) Star Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet29
symmetry	Space Group: P 65 2 2	R_factor 0.229 R_Free 0.287
crystal cell	length a length b length c angle alpha angle beta angle gamma 92.400 92.400 272.790 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	2.70 Å
ligand	CA	enzyme
Primary reference	Interactions between lipids and human anti-HIV antibody 4E10 can be reduced without ablating neutralizing activity., Xu H, Song L, Kim M, Holmes MA, Kraft Z, Sellhorn G, Reinherz EL, Stamatatos L, Strong RK, J Virol. 2010 Jan;84(2):1076-88. Epub 2009 Nov 11. PMID:19906921

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (83 Kb) [Save to disk] Biological Unit Coordinates (3h3p.pdb1.gz) 39 Kb Biological Unit Coordinates (3h3p.pdb2.gz) 40 Kb LPC: Ligand-Protein Contacts for 3H3P CSU: Contacts of Structural Units for 3H3P Structure Factors (295 Kb) Retrieve 3H3P in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3H3P from S2C, [Save to disk] Re-refined 3h3p structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3H3P in 3D

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Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3H3P, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3h3p_L] [3h3p_S] [3h3p] [3h3p_M] [3h3p_T] [3h3p_I] [3h3p_H] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 3H3P: [IGv ] by SMART

Other resources with information on 3H3P

Community annotation for 3H3P at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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