3H9F	Transferase	date	Apr 30, 2009
title	Crystal Structure Of Human Dual Specificity Protein Kinase ( Complex With A Pyrimido-Diazepin Ligand
authors	P.Filippakopoulos, M.Soundararajan, T.Keates, J.M.Elkins, O.King O.Fedorov, S.S.Picaud, A.C.W.Pike, W.Yue, A.Chaikuad, F.Von Delf C.H.Arrowsmith, A.Edwards, J.Weigelt, C.Bountra, N.Kwiatkowski, S.Knapp, Structural Genomics Consortium (Sgc)
compound		source
Molecule: Dual Specificity Protein Kinase Ttk Chain: A Synonym: Phosphotyrosine Picked Threonine-Protein Kinase, P Ec: 2.7.12.1 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Mps1l1, Ttk Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21(De3)-R3 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pnic28-Bsa4
symmetry	Space Group: I 2 2 2	R_factor 0.207 R_Free 0.253
crystal cell	length a length b length c angle alpha angle beta angle gamma 70.690 110.750 115.200 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.60 Å
ligand	92M, MG, SEP, TPO	enzyme	Transferase E.C.2.7.12.1 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	Small-molecule kinase inhibitors provide insight into Mps1 cell cycle function., Kwiatkowski N, Jelluma N, Filippakopoulos P, Soundararajan M, Manak MS, Kwon M, Choi HG, Sim T, Deveraux QL, Rottmann S, Pellman D, Shah JV, Kops GJ, Knapp S, Gray NS, Nat Chem Biol. 2010 May;6(5):359-68. Epub 2010 Apr 11. PMID:20383151

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (50 Kb) [Save to disk] Biological Unit Coordinates (3h9f.pdb1.gz) 169 Kb Biological Unit Coordinates (3h9f.pdb2.gz) 44 Kb LPC: Ligand-Protein Contacts for 3H9F CSU: Contacts of Structural Units for 3H9F Likely Quarternary Molecular Structure file(s) for 3H9F Structure Factors (222 Kb) Retrieve 3H9F in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3H9F from S2C, [Save to disk] Re-refined 3h9f structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3H9F in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3H9F

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3H9F, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3h9f] [3h9f_A] SWISS-PROT database: [P33981] Domain organization of [TTK_HUMAN] by SWISSPFAM Domain found in 3H9F: [S_TKc ] by SMART

Other resources with information on 3H9F

Community annotation for 3H9F at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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