3HEM Transferase date May 09, 2009
title Structure Of Mycobacterium Tuberculosis Mycolic Acid Cyclopr Synthase Cmaa2 In Complex With Dioctylamine
authors Z.Liu, J.C.Sacchettini
compound source
Molecule: Cyclopropane-Fatty-Acyl-Phospholipid Synthase 2
Chain: A
Synonym: Cyclopropane Fatty Acid Synthase, Cfa Synthase, Cy Mycolic Acid Synthase 2;
Ec: 2.1.1.79
Engineered: Yes
Organism_scientific: Mycobacterium Tuberculosis
Organism_taxid: 1773
Strain: H37rv
Gene: Cma2, Cmaa2, Mt0524, Mtcy20g9.30c, Rv0503c
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21 (De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet28b
symmetry Space Group: I 41 2 2
R_factor 0.243 R_Free 0.266
crystal
cell
length a length b length c angle alpha angle beta angle gamma
106.857 106.857 224.979 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.39 Å
ligand CO3, D22 enzyme Transferase E.C.2.1.1.79 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (53 Kb) [Save to disk]
  • Biological Unit Coordinates (3hem.pdb1.gz) 95 Kb
  • LPC: Ligand-Protein Contacts for 3HEM
  • CSU: Contacts of Structural Units for 3HEM
  • Likely Quarternary Molecular Structure file(s) for 3HEM
  • Structure Factors (306 Kb)
  • Retrieve 3HEM in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3HEM from S2C, [Save to disk]
  • Re-refined 3hem structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3HEM in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3HEM
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3HEM, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3hem] [3hem_A]
  • SWISS-PROT database: [P0A5P0]
  • Domain organization of [CFA2_MYCTU] by SWISSPFAM
  • Other resources with information on 3HEM
  • Community annotation for 3HEM at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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