3HLV Transcription date May 28, 2009
title Crystal Structure Of Human Estrogen Receptor Alpha Ligand-Bi Domain In Complex With A Glucocorticoid Receptor Interactin Nr Box II Peptide And 16-Alpha-Hydroxy-Estrone ((8s,9r,13 16r)-3,16-Dihydroxy-13-Methyl-7,8,9,11,12,14,15, 16-Octahyd Cyclopenta[A]Phenanthren-17-One
authors S.S.Rajan, Y.Kim, K.Vanek, A.Joachimiak, G.L.Greene
compound source
Molecule: Estrogen Receptor
Chain: A, B
Fragment: Unp Residues 298-550
Synonym: Er, Estradiol Receptor, Er-Alpha, Nuclear Receptor Group A Member 1;
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Esr, Esr1, Nr3a1
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Mcsg7

Molecule: Nuclear Receptor Coactivator 2
Chain: C, D
Fragment: Unp Residues 686-698
Synonym: Ncoa-2, Transcriptional Intermediary Factor 2
Engineered: Yes

Synthetic: Yes
symmetry Space Group: P 1 21 1
R_factor 0.217 R_Free 0.269
crystal
cell
length a length b length c angle alpha angle beta angle gamma
55.826 83.373 58.481 90.00 108.29 90.00
method X-Ray Diffractionresolution 3.00 Å
ligand J2Z enzyme
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (86 Kb) [Save to disk]
  • Biological Unit Coordinates (3hlv.pdb1.gz) 81 Kb
  • LPC: Ligand-Protein Contacts for 3HLV
  • CSU: Contacts of Structural Units for 3HLV
  • Structure Factors (84 Kb)
  • Retrieve 3HLV in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3HLV from S2C, [Save to disk]
  • Re-refined 3hlv structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3HLV in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3HLV
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3HLV, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3hlv_D] [3hlv] [3hlv_A] [3hlv_B] [3hlv_C]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 3HLV: [HOLI ] by SMART
  • Other resources with information on 3HLV
  • Community annotation for 3HLV at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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