3HN7 Crystal structure of a murein peptide ligase mpl (psyc_0032) from psychrobacter arcticus 273-4 at 1.65 A resolution date
authors JCSG, Joint.Center.for.Structural.Genomics.
compound source
symmetry
R_factor
R_Free 0.187
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.65
ligand MSE enzyme
Gene PSYC ; YP
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructure and function of the first full-length murein Peptide ligase (mpl) cell wall recycling protein., Das D, Herve M, Feuerhelm J, Farr CL, Chiu HJ, Elsliger MA, Knuth MW, Klock HE, Miller MD, Godzik A, Lesley SA, Deacon AM, Mengin-Lecreulx D, Wilson IA, PLoS One. 2011 Mar 18;6(3):e17624. PMID:21445265
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (93 Kb) [Save to disk]
  • Biological Unit Coordinates (3hn7.pdb1.gz) 86 Kb
  • LPC: Ligand-Protein Contacts for 3HN7
  • CSU: Contacts of Structural Units for 3HN7
  • Likely Quarternary Molecular Structure file(s) for 3HN7
  • Structure Factors (7324 Kb)
  • Retrieve 3HN7 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3HN7 from S2C, [Save to disk]
  • Re-refined 3hn7 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3HN7 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 3HN7
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3HN7, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3hn7] [3hn7_A]
  • SWISS-PROT database: [Q4FVQ2]
  • Domain organization of [Q4FVQ2_PSYA2] by SWISSPFAM
    • Other resources with information on 3HN7
  • Community annotation for 3HN7 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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