3HP2	Transferase	date	Jun 03, 2009
title	Crystal Structure Of Human P38alpha Complexed With A Pyridin Compound
authors	H.S.Shieh, J.M.Williams, R.A.Stegeman, R.G.Kurumbail
compound		source
Molecule: Mitogen-Activated Protein Kinase 14 Chain: A Synonym: Mitogen-Activated Protein Kinase P38 Alpha, Map Ki Alpha, Cytokine Suppressive Anti-Inflammatory Drug-Binding Csaid-Binding Protein, Csbp, Max-Interacting Protein 2, Map Mxi2, Sapk2a; Ec: 2.7.11.24 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Csbp, Csbp1, Csbp2, Cspb1, Mapk14, Mxi2, Thp-1 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Dh10b Expression_system_vector_type: Plasmid Expression_system_plasmid: Pgex4t-1
symmetry	Space Group: P 21 21 21	R_factor 0.206 R_Free 0.252
crystal cell	length a length b length c angle alpha angle beta angle gamma 65.246 74.440 77.238 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.15 Å
ligand	I46, P36 BindingDB	enzyme	Transferase E.C.2.7.11.24 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	Discovery of N-substituted pyridinones as potent and selective inhibitors of p38 kinase., Selness SR, Devraj RV, Monahan JB, Boehm TL, Walker JK, Devadas B, Durley RC, Kurumbail R, Shieh H, Xing L, Hepperle M, Rucker PV, Jerome KD, Benson AG, Marrufo LD, Madsen HM, Hitchcock J, Owen TJ, Christie L, Promo MA, Hickory BS, Alvira E, Naing W, Blevis-Bal R, Bioorg Med Chem Lett. 2009 Oct 15;19(20):5851-6. Epub 2009 Aug 27. PMID:19751974

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (66 Kb) [Save to disk] Biological Unit Coordinates (3hp2.pdb1.gz) 60 Kb LPC: Ligand-Protein Contacts for 3HP2 CSU: Contacts of Structural Units for 3HP2 Structure Factors (317 Kb) Retrieve 3HP2 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3HP2 from S2C, [Save to disk] Re-refined 3hp2 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3HP2 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3HP2

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3HP2, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3hp2_A] [3hp2] SWISS-PROT database: [Q16539] Domain organization of [MK14_HUMAN] by SWISSPFAM Domain found in 3HP2: [S_TKc ] by SMART

Other resources with information on 3HP2

Community annotation for 3HP2 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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