3I18 Structural Genomics, Unknown Function date Jun 25, 2009
title Crystal Structure Of The Pdz Domain Of The Sdrc-Like Protein From Listeria Monocytogenes, Northeast Structural Genomics Target Lmr166b
authors F.Forouhar, S.Lew, J.Seetharaman, J.Janjua, R.Xiao, C.Ciccosanti, J.K.Everett, R.Nair, T.B.Acton, B.Rost, G.T.Montelione, L.Tong, J Northeast Structural Genomics Consortium (Nesg)
compound source
Molecule: Lmo2051 Protein
Chain: A
Fragment: Pdz Domain
Engineered: Yes
 Organism_scientific: Listeria Monocytogenes
Organism_taxid: 1639
Strain: Egd-E
Gene: Lmo2051
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3)+ Magic
Expression_system_vector_type: Pet21
Expression_system_plasmid: Bl21
symmetry Space Group: C 2 2 21
R_factor 0.193 R_Free 0.226
crystal
cell
length a length b length c angle alpha angle beta angle gamma
35.705 90.475 51.811 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.70 Å
ligand BR, MSE enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (22 Kb) [Save to disk]
  • Biological Unit Coordinates (3i18.pdb1.gz) 18 Kb
  • LPC: Ligand-Protein Contacts for 3I18
  • CSU: Contacts of Structural Units for 3I18
  • Likely Quarternary Molecular Structure file(s) for 3I18
  • Structure Factors (152 Kb)
  • Retrieve 3I18 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3I18 from S2C, [Save to disk]
  • Re-refined 3i18 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
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  • Proteopedia, because life has more than 2D.
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    • Visual 3D analysis of 3I18
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3I18, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3i18] [3i18_A]
  • SWISS-PROT database: [Q8Y5K8]
  • Domain organization of [Q8Y5K8_LISMO] by SWISSPFAM
  • Domain found in 3I18: [PDZ ] by SMART
    • Other resources with information on 3I18
  • Community annotation for 3I18 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
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