3IA6	Transcription	date	Jul 13, 2009
title	X-Ray Crystal Structure Of The Nuclear Hormone Receptor Ppar A Complex With A Ppar Gammaalpha Dual Agonist
authors	J.F.Ohren
compound		source
Molecule: Peroxisome Proliferator-Activated Receptor Gamma Chain: A, B Fragment: Unp Residue 235-505 Synonym: Ppar-Gamma, Nuclear Receptor Subfamily 1 Group C M Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Pparg, Nr1c3 Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: C 1 2 1	R_factor 0.238 R_Free 0.297
crystal cell	length a length b length c angle alpha angle beta angle gamma 93.041 62.187 118.547 90.00 102.66 90.00
method	X-Ray Diffraction	resolution	2.31 Å
ligand	UNT BindingDB	enzyme
Gene Ontology	Chain Function Process Component A, B
Primary reference	Synthesis and evaluation of novel alpha-heteroaryl-phenylpropanoic acid derivatives as PPARalpha/gamma dual agonists., Casimiro-Garcia A, Bigge CF, Davis JA, Padalino T, Pulaski J, Ohren JF, McConnell P, Kane CD, Royer LJ, Stevens KA, Auerbach B, Collard W, McGregor C, Song K, Bioorg Med Chem. 2009 Oct 15;17(20):7113-25. Epub 2009 Sep 6. PMID:19783444

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (89 Kb) [Save to disk] Biological Unit Coordinates (3ia6.pdb1.gz) 84 Kb Biological Unit Coordinates (3ia6.pdb2.gz) 85 Kb LPC: Ligand-Protein Contacts for 3IA6 CSU: Contacts of Structural Units for 3IA6 Structure Factors (443 Kb) Retrieve 3IA6 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3IA6 from S2C, [Save to disk] Re-refined 3ia6 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3IA6 in 3D

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Visual 3D analysis of 3IA6

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3IA6, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3ia6] [3ia6_A] [3ia6_B] SWISS-PROT database: [P37231] Domain organization of [PPARG_HUMAN] by SWISSPFAM Domain found in 3IA6: [HOLI ] by SMART

Other resources with information on 3IA6

Community annotation for 3IA6 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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