3ID6	Transferase	date	Jul 20, 2009
title	Crystal Structure Of Sulfolobus Solfataricus Nop5 (1-262) An Fibrillarin Complex
authors	K.Ye
compound		source
Molecule: Pre Mrna Splicing Protein Chain: A Fragment: Ntd And Coiled-Coil Domain (Residues 1-262) Synonym: Nop5 Engineered: Yes Mutation: Yes		Organism_scientific: Sulfolobus Solfataricus Organism_taxid: 2287 Gene: Sso0939 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21(De3)Ril+ Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet28a
Molecule: Fibrillarin-Like Rrnatrna 2'-O-Methyltransferase Chain: C Synonym: Fibrillarin, Fib Ec: 2.1.1.- Engineered: Yes Mutation: Yes		Organism_scientific: Sulfolobus Solfataricus Organism_taxid: 2287 Gene: Flpa, Sso0940, C33_014 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21(De3)Ril+ Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet28a
symmetry	Space Group: C 2 2 21	R_factor 0.232 R_Free 0.285
crystal cell	length a length b length c angle alpha angle beta angle gamma 75.517 182.364 79.140 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.60 Å
ligand	SAM	enzyme	Transferase E.C.2.1.1 BRENDA
Gene	C33
Gene Ontology	Chain Function Process Component C
Primary reference	Structural organization of box C/D RNA-guided RNA methyltransferase., Ye K, Jia R, Lin J, Ju M, Peng J, Xu A, Zhang L, Proc Natl Acad Sci U S A. 2009 Aug 5. PMID:19666563

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (83 Kb) [Save to disk] Biological Unit Coordinates (3id6.pdb1.gz) 151 Kb LPC: Ligand-Protein Contacts for 3ID6 CSU: Contacts of Structural Units for 3ID6 Structure Factors (136 Kb) Retrieve 3ID6 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3ID6 from S2C, [Save to disk] Re-refined 3id6 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3ID6 in 3D

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Visual 3D analysis of 3ID6

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3ID6, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3id6_C] [3id6] [3id6_A] SWISS-PROT database: [P58032] [Q97ZH3] Domain organization of [FLPA_SULSO] [Q97ZH3_SULSO] by SWISSPFAM Domains found in 3ID6: [Fibrillarin] [NOSIC ] by SMART

Other resources with information on 3ID6

Community annotation for 3ID6 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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