3IEI Transferase date Jul 22, 2009
title Crystal Structure Of Human Leucine Carboxylmethyltransferase Complex With S-Adenosyl Homocysteine
authors Y.Xing, P.D.Jeffry
compound source
Molecule: Leucine Carboxyl Methyltransferase 1
Chain: A, B, C, D, E, F, G, H
Synonym: Protein-Leucine O-Methyltransferase
Ec: 2.1.1.-
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Cgi-68, Lcmt, Lcmt-1, Lcmt1
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet22b
symmetry Space Group: P 1
R_factor 0.184 R_Free 0.232
crystal
cell
length a length b length c angle alpha angle beta angle gamma
106.036 81.127 82.816 105.41 93.97 104.29
method X-Ray Diffractionresolution 1.90 Å
ligand GOL, MES, SAH enzyme Transferase E.C.2.1.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
F, A, E, B, H, C, D, G


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (441 Kb) [Save to disk]
  • Biological Unit Coordinates (3iei.pdb1.gz) 60 Kb
  • Biological Unit Coordinates (3iei.pdb2.gz) 59 Kb
  • Biological Unit Coordinates (3iei.pdb3.gz) 59 Kb
  • Biological Unit Coordinates (3iei.pdb4.gz) 60 Kb
  • Biological Unit Coordinates (3iei.pdb5.gz) 61 Kb
  • Biological Unit Coordinates (3iei.pdb6.gz) 60 Kb
  • Biological Unit Coordinates (3iei.pdb7.gz) 60 Kb
  • Biological Unit Coordinates (3iei.pdb8.gz) 58 Kb
  • LPC: Ligand-Protein Contacts for 3IEI
  • CSU: Contacts of Structural Units for 3IEI
  • Structure Factors (2912 Kb)
  • Retrieve 3IEI in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3IEI from S2C, [Save to disk]
  • Re-refined 3iei structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3IEI in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3IEI
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3IEI, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3iei_F] [3iei_C] [3iei_D] [3iei_G] [3iei_A] [3iei_E] [3iei_B] [3iei] [3iei_H]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 3IEI
  • Community annotation for 3IEI at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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