3IG7	Transferase	date	Jul 27, 2009
title	Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor Efp With Cdk-2
authors	J.Pandit
compound		source
Molecule: Cell Division Protein Kinase 2 Chain: A Synonym: P33 Protein Kinase Ec: 2.7.11.22 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Cdk2 Expression_system: Spodoptera Frugiperda Expression_system_taxid: 7108
symmetry	Space Group: P 21 21 21	R_factor 0.208 R_Free 0.257
crystal cell	length a length b length c angle alpha angle beta angle gamma 53.343 70.994 71.811 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.80 Å
ligand	ACE, EFP	enzyme	Transferase E.C.2.7.11.22 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	Potent and cellularly active 4-aminoimidazole inhibitors of cyclin-dependent kinase 5/p25 for the treatment of Alzheimer's disease., Helal CJ, Kang Z, Lucas JC, Gant T, Ahlijanian MK, Schachter JB, Richter KE, Cook JM, Menniti FS, Kelly K, Mente S, Pandit J, Hosea N, Bioorg Med Chem Lett. 2009 Aug 8. PMID:19700321

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (52 Kb) [Save to disk] Biological Unit Coordinates (3ig7.pdb1.gz) 48 Kb LPC: Ligand-Protein Contacts for 3IG7 CSU: Contacts of Structural Units for 3IG7 Structure Factors (817 Kb) Retrieve 3IG7 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3IG7 from S2C, [Save to disk] Re-refined 3ig7 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3IG7 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3IG7

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3IG7, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3ig7] [3ig7_A] SWISS-PROT database: [P24941] Domain organization of [CDK2_HUMAN] by SWISSPFAM Domain found in 3IG7: [S_TKc ] by SMART

Other resources with information on 3IG7

Community annotation for 3IG7 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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