3IHZ Isomerase date Jul 31, 2009
title Crystal Structure Of The Fk506 Binding Domain Of Plasmodium Fkbp35 In Complex With Fk506
authors I.A.Qureshi, R.Alag, H.S.Yoon, J.Lescar
compound source
Molecule: 70 Kda Peptidylprolyl Isomerase, Putative
Chain: A, B
Fragment: Fk506-Binding Domain, Residues 1-126
Engineered: Yes
Organism_scientific: Plasmodium Vivax
Organism_taxid: 5855
Strain: Salvador I
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Psumo
symmetry Space Group: P 1 21 1
R_factor 0.188 R_Free 0.233
crystal
cell
length a length b length c angle alpha angle beta angle gamma
55.900 40.900 56.900 90.00 109.50 90.00
method X-Ray Diffractionresolution 1.67 Å
ligand FK5 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceNMR and crystallographic structures of the FK506 binding domain of human malarial parasite Plasmodium vivax FKBP35., Alag R, Qureshi IA, Bharatham N, Shin J, Lescar J, Yoon HS, Protein Sci. 2010 Aug;19(8):1577-86. PMID:20572013
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (49 Kb) [Save to disk]
  • Biological Unit Coordinates (3ihz.pdb1.gz) 44 Kb
  • LPC: Ligand-Protein Contacts for 3IHZ
  • CSU: Contacts of Structural Units for 3IHZ
  • Structure Factors (399 Kb)
  • Retrieve 3IHZ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3IHZ from S2C, [Save to disk]
  • Re-refined 3ihz structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3IHZ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3IHZ
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3IHZ, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3ihz_A] [3ihz] [3ihz_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 3IHZ
  • Community annotation for 3IHZ at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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