3ILA	Signaling Protein	date	Aug 06, 2009
title	Crystal Structure Of Rabbit Ryanodine Receptor 1 N-Terminal 205)
authors	P.A.Lobo, F.Van Petegem
compound		source
Molecule: Ryanodine Receptor 1 Chain: A, B, C, D, E, F, G, H, I Fragment: N-Terminal Domain Synonym: Ryr-1, Ryr1, Skeletal Muscle-Type Ryanodine Recept Skeletal Muscle Calcium Release Channel; Engineered: Yes		Organism_scientific: Oryctolagus Cuniculus Organism_common: European Rabbit,Japanese White Rabbit,Dome Rabbit,Rabbits; Organism_taxid: 9986 Gene: Ryr1 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Rosetta De3 Placi Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet28 Hmt
symmetry	Space Group: P 1 21 1	R_factor 0.274 R_Free 0.320
crystal cell	length a length b length c angle alpha angle beta angle gamma 70.734 155.705 81.613 90.00 110.63 90.00
method	X-Ray Diffraction	resolution	2.90 Å
Gene Ontology	Chain Function Process Component F, A, E, B, H, C, D, I, G
Primary reference	Crystal structures of the N-terminal domains of cardiac and skeletal muscle ryanodine receptors: insights into disease mutations., Lobo PA, Van Petegem F, Structure. 2009 Nov 11;17(11):1505-14. PMID:19913485

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (201 Kb) [Save to disk] Biological Unit Coordinates (3ila.pdb1.gz) 26 Kb Biological Unit Coordinates (3ila.pdb2.gz) 26 Kb Biological Unit Coordinates (3ila.pdb3.gz) 26 Kb Biological Unit Coordinates (3ila.pdb4.gz) 26 Kb Biological Unit Coordinates (3ila.pdb5.gz) 25 Kb Biological Unit Coordinates (3ila.pdb6.gz) 26 Kb Biological Unit Coordinates (3ila.pdb7.gz) 25 Kb Biological Unit Coordinates (3ila.pdb8.gz) 25 Kb Biological Unit Coordinates (3ila.pdb9.gz) 17 Kb CSU: Contacts of Structural Units for 3ILA Structure Factors (547 Kb) Retrieve 3ILA in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3ILA from S2C, [Save to disk] Re-refined 3ila structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3ILA in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3ILA

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3ILA, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3ila] [3ila_H] [3ila_E] [3ila_B] [3ila_G] [3ila_A] [3ila_C] [3ila_F] [3ila_I] [3ila_D] SWISS-PROT database: [P11716] Domain organization of [RYR1_RABIT] by SWISSPFAM Domain found in 3ILA: [MIR ] by SMART

Other resources with information on 3ILA

Community annotation for 3ILA at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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