3IO7 Transferase date Aug 13, 2009
title 2-Aminopyrazolo[1,5-A]Pyrimidines As Potent And Selective In Of Jak2
authors H.J.Zuccola, M.W.Ledeboer, A.C.Pierce
compound source
Molecule: Tyrosine-Protein Kinase Jak2
Chain: A
Fragment: Jak Kinase Domain(Unp Residue 842-1132)
Synonym: Janus Kinase 2, Jak-2
Ec: 2.7.10.2
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Jak2
Expression_system: Baculovirus
Expression_system_taxid: 10469
Expression_system_strain: Sf9
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pbev1
symmetry Space Group: C 2 2 21
R_factor 0.199 R_Free 0.294
crystal
cell
length a length b length c angle alpha angle beta angle gamma
93.922 101.752 67.194 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.60 Å
ligand 1P5, PTR enzyme Transferase E.C.2.7.10.2 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary reference2-Aminopyrazolo[1,5-a]pyrimidines as potent and selective inhibitors of JAK2., Ledeboer MW, Pierce AC, Duffy JP, Gao H, Messersmith D, Salituro FG, Nanthakumar S, Come J, Zuccola HJ, Swenson L, Shlyakter D, Mahajan S, Hoock T, Fan B, Tsai WJ, Kolaczkowski E, Carrier S, Hogan JK, Zessis R, Pazhanisamy S, Bennani YL, Bioorg Med Chem Lett. 2009 Dec 1;19(23):6529-33. Epub 2009 Oct 24. PMID:19857967
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (54 Kb) [Save to disk]
  • Biological Unit Coordinates (3io7.pdb1.gz) 49 Kb
  • LPC: Ligand-Protein Contacts for 3IO7
  • CSU: Contacts of Structural Units for 3IO7
  • Structure Factors (130 Kb)
  • Retrieve 3IO7 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3IO7 from S2C, [Save to disk]
  • Re-refined 3io7 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3IO7 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3IO7
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3IO7, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3io7_A] [3io7]
  • SWISS-PROT database: [O60674]
  • Domain organization of [JAK2_HUMAN] by SWISSPFAM
  • Domain found in 3IO7: [TyrKc ] by SMART
  • Other resources with information on 3IO7
  • Community annotation for 3IO7 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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