4V6L	Structural insights into cognate vs. near-cognate discrimination during decoding.	date
authors	Agirrezabala, X., Schreiner, E., Trabuco, L.G., Lei, J., Ortiz-Meoz, R.F., Schulten, K., Green, R., Frank, J.
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution	13.20
note	4V6L supersedes 3IZT, 3IZV
Gene Ontology	Chain Function Process Component AC AF AG AH AI AJ AK AL AM AN AO AP AQ AR AS AT nuclease activity endonuclease activity endodeoxyribonuclease activi... AU AV AW AX ornithine decarboxylase inhi... AY BC BD BE BF BG BH BI BJ BK BL BM BN BO BP BQ BR translation repressor activi... BS BT BU BV BW BX BY BZ Ba Bb Bc Bd Be Bf Bg
Primary reference	Structural insights into cognate versus near-cognate discrimination during decoding., Agirrezabala X, Schreiner E, Trabuco LG, Lei J, Ortiz-Meoz RF, Schulten K, Green R, Frank J, EMBO J. 2011 Mar 4. PMID:21378755

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1053 Kb) [Save to disk] CSU: Contacts of Structural Units for 4V6L Retrieve 4V6L in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 4V6L from S2C, [Save to disk]

View 4V6L in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 4V6L

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4v6l_AE] [4v6l_AQ] [4v6l_BI] [4v6l_BW] [4v6l_Bb] [4v6l_AX] [4v6l_BX] [4v6l_AO] [4v6l_BF] [4v6l_BY] [4v6l_BR] [4v6l_AJ] [4v6l_BO] [4v6l_BS] [4v6l_BE] [4v6l_BG] [4v6l_AA] [4v6l_AB] [4v6l_AN] [4v6l_AK] [4v6l_BC] [4v6l_BM] [4v6l_Be] [4v6l_Ba] [4v6l_AR] [4v6l_AF] [4v6l_BA] [4v6l] [4v6l_AS] [4v6l_AG] [4v6l_BT] [4v6l_AV] [4v6l_Bd] [4v6l_AL] [4v6l_AH] [4v6l_Bf] [4v6l_AC] [4v6l_BH] [4v6l_BN] [4v6l_AP] [4v6l_BL] [4v6l_BJ] [4v6l_BK] [4v6l_AT] [4v6l_BB] [4v6l_Bg] [4v6l_AI] [4v6l_BV] [4v6l_AD] [4v6l_AW] [4v6l_AU] [4v6l_BU] [4v6l_Bc] [4v6l_BZ] [4v6l_AM] [4v6l_BD] [4v6l_BQ] [4v6l_AY] [4v6l_BP] SWISS-PROT database: Domain organization of by SWISSPFAM Domains found in 4V6L: [KH] [KOW] [RL11] [Ribosomal_L14] [Ribosomal_L2] [Ribosomal_L2_C] [Ribosomal_S10] [Ribosomal_S15] [Ribosomal_S4] [S4 ] by SMART

Other resources with information on 4V6L

Community annotation for 4V6L at PDBWiki (http://pdbwiki.org)

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