3J15	Translation Transport Protein	date	Dec 12, 2011
title	Model Of Ribosome-Bound Archaeal Pelota And Abce1
authors	T.Becker, S.Franckenberg, S.Wickles, C.J.Shoemaker, A.M.Anger, J. P.Armache, H.Sieber, C.Ungewickell, O.Berninghausen, I.Daberkow A.Karcher, M.Thomm, K.P.Hopfner, R.Green, R.Beckmann
compound		source
Molecule: Protein Pelota Chain: A Ec: 3.1.-.- Engineered: Yes		Organism_scientific: Thermococcus Kodakarensis Organism_common: Pyrococcus Kodakaraensis Organism_taxid: 311400 Gene: Pela, Tk0964 Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_strain: Rosetta(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet28
Molecule: Abc Transporter Atp-Binding Protein Chain: B Synonym: Abce1 Engineered: Yes		Organism_scientific: Pyrococcus Furiosus Organism_taxid: 2261 Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_strain: Rosetta(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet28
symmetry	Space Group: P 1	R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma 1.000 1.000 1.000 90.00 90.00 90.00
method	Electron Microscopy	resolution	6.60 Å
ligand	ADP, SF4	enzyme	Hydrolase E.C.3.1 BRENDA
Gene Ontology	Chain Function Process Component A B
Primary reference	Structural basis of highly conserved ribosome recycling in eukaryotes and archaea., Becker T, Franckenberg S, Wickles S, Shoemaker CJ, Anger AM, Armache JP, Sieber H, Ungewickell C, Berninghausen O, Daberkow I, Karcher A, Thomm M, Hopfner KP, Green R, Beckmann R, Nature. 2012 Feb 22;482(7386):501-6. doi: 10.1038/nature10829. PMID:22358840

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (140 Kb) [Save to disk] Biological Unit Coordinates (3j15.pdb1.gz) 134 Kb LPC: Ligand-Protein Contacts for 3J15 CSU: Contacts of Structural Units for 3J15 Retrieve 3J15 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3J15 from S2C, [Save to disk]

View 3J15 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3J15

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3J15, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3j15_A] [3j15] [3j15_B] SWISS-PROT database: Domain organization of by SWISSPFAM Domains found in 3J15: [AAA] [eRF1_1 ] by SMART

Other resources with information on 3J15

Community annotation for 3J15 at PDBWiki (http://pdbwiki.org)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---