OCA Atlas for 3J2W

3J2W

Virus

date

Jan 28, 2013

title

Electron Cryo-Microscopy Of Chikungunya Virus

authors

S.Sun, Y.Xiang, M.G.Rossmann

compound

source

Molecule: Glycoprotein E1
Chain: A, B, C, D
Fragment: Unp Residues 810-1202
Engineered: Yes

Organism_scientific: Chikungunya Virus
Organism_common: Chikv
Organism_taxid: 371095
Strain: 37997
Expression_system: Homo Sapiens
Expression_system_common: Human
Expression_system_taxid: 9606
Expression_system_cell_line: Hek 293f

Molecule: Glycoprotein E2
Chain: M, N, O
Fragment: Unp Residues 332-667
Engineered: Yes

Molecule: Glycoprotein E2
Chain: P
Fragment: Unp Residues 332-667
Engineered: Yes

Molecule: Glycoprotein E1
Chain: E, F, G, H
Fragment: Unp Residues 668-748
Engineered: Yes

Molecule: Glycoprotein E2
Chain: Q, R, S, T
Fragment: Unp Residues 1203-1248
Engineered: Yes

Molecule: Capsid Protein
Chain: I, J, K, L
Fragment: Unp Residues 113-261
Engineered: Yes

symmetry

Space Group: P 1

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma
1.000	1.000	1.000	90.00	90.00	90.00

method

Electron Microscopy

resolution

5.00 Å

Gene
Ontology

Chain	Function	Process	Component
F, E, C, A, B, H, D, G
K, L, J, I
S, T, N, Q, M, O, P, R

Primary reference

Structural analyses at pseudo atomic resolution of Chikungunya virus and antibodies show mechanisms of neutralization., Sun S, Xiang Y, Akahata W, Holdaway H, Pal P, Zhang X, Diamond MS, Nabel GJ, Rossmann MG, Elife. 2013;2:e00435. doi: 10.7554/eLife.00435. Epub 2013 Apr 2. PMID:23577234

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (633 Kb) [Save to disk]