3J9F Poliovirus complexed with soluble, deglycosylated poliovirus receptor (Pvr) at 4 degrees C date
authors Strauss, M., Filman, D.J., Belnap, D.M., Cheng, N., Noel, R.T., Hogle, J.M.
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 9.00
ligand BMA, FUC, MAN, MYR, NAG, PLM enzyme
Gene
Ontology
ChainFunctionProcessComponent
1, 3, 2


4


Primary referenceNECTIN-LIKE INTERACTIONS BETWEEN POLIOVIRUS AND ITS RECEPTOR TRIGGER CONFORMATIONAL CHANGES ASSOCIATED WITH CELL ENTRY., Strauss M, Filman DJ, Belnap DM, Cheng N, Noel RT, Hogle JM, J Virol. 2015 Jan 28. pii: JVI.03101-14. PMID:25631086
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (170 Kb) [Save to disk]
  • Biological Unit Coordinates (3j9f.pdb1.gz) 9399 Kb
  • LPC: Ligand-Protein Contacts for 3J9F
  • CSU: Contacts of Structural Units for 3J9F
  • Retrieve 3J9F in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3J9F from S2C, [Save to disk]
  • View 3J9F in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3J9F
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3J9F, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3j9f_1] [3j9f_8] [3j9f] [3j9f_2] [3j9f_3] [3j9f_4] [3j9f_7] [3j9f_9]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 3J9F: [IGv ] by SMART
  • Other resources with information on 3J9F
  • Community annotation for 3J9F at PDBWiki (http://pdbwiki.org)

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science