3JUE	Protein Transport Endocytosis	date	Sep 15, 2009
title	Crystal Structure Of Arfgap And Ank Repeat Domain Of Acap1
authors	X.Pang, K.Zhang, J.Ma, Q.Zhou, F.Sun
compound		source
Molecule: Arfgap With Coiled-Coil, Ank Repeat And Ph Domain Containing Protein 1; Chain: A, B Fragment: Arfgap And Ank Repeat Domain, Residues 378-740 Synonym: Centaurin-Beta-1, Cnt-B1 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Acap1, Centb1, Kiaa0050 Expression_system: Escherichia Coli Expression_system_taxid: 511693 Expression_system_strain: Bl21 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pgex-6p-1
symmetry	Space Group: P 21 21 2	R_factor 0.202 R_Free 0.219
crystal cell	length a length b length c angle alpha angle beta angle gamma 107.809 163.473 41.092 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.30 Å
ligand	SO4, ZN	enzyme
Gene Ontology	Chain Function Process Component A, B
Primary reference	Mechanistic insights into regulated cargo binding by ACAP1., Bai M, Pang X, Lou J, Zhou Q, Zhang K, Ma J, Li J, Sun F, Hsu V, J Biol Chem. 2012 May 29. PMID:22645133

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (167 Kb) [Save to disk] Biological Unit Coordinates (3jue.pdb1.gz) 81 Kb Biological Unit Coordinates (3jue.pdb2.gz) 81 Kb LPC: Ligand-Protein Contacts for 3JUE CSU: Contacts of Structural Units for 3JUE Structure Factors (822 Kb) Retrieve 3JUE in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3JUE from S2C, [Save to disk] Re-refined 3jue structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3JUE in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3JUE

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3JUE, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3jue] [3jue_A] [3jue_B] SWISS-PROT database: Domain organization of by SWISSPFAM Domains found in 3JUE: [ANK] [ArfGap ] by SMART

Other resources with information on 3JUE

Community annotation for 3JUE at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---