3JWM Oxidoreductase Oxidoreductase Inhibitor date Sep 18, 2009
title Crystal Structure Of Bacillus Anthracis Dihydrofolate Reduct Complexed With Nadph And (S)-2,4-Diamino-5-(3-Methoxy-3-(3, Trimethoxyphenyl)Prop-1-Ynyl)-6-Methylpyrimidine (Ucp114a)
authors A.C.Anderson, J.M.Beierlein, N.G.Karri
compound source
Molecule: Dihydrofolate Reductase
Chain: A, B
Ec: 1.5.1.3
Engineered: Yes
Mutation: Yes
Organism_scientific: Bacillus Anthracis
Organism_taxid: 1392
Gene: Bas2083, Ba_2237, Dfra, Gbaa2237, Gbaa_2237
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: M15
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pqe2
symmetry Space Group: P 42
R_factor 0.198 R_Free 0.243
crystal
cell
length a length b length c angle alpha angle beta angle gamma
77.884 77.884 67.431 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.57 Å
ligand 5WB, NDP enzyme Oxidoreductase E.C.1.5.1.3 BRENDA
Genes BA, GBAA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (66 Kb) [Save to disk]
  • Biological Unit Coordinates (3jwm.pdb1.gz) 61 Kb
  • Biological Unit Coordinates (3jwm.pdb2.gz) 61 Kb
  • LPC: Ligand-Protein Contacts for 3JWM
  • CSU: Contacts of Structural Units for 3JWM
  • Structure Factors (192 Kb)
  • Retrieve 3JWM in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3JWM from S2C, [Save to disk]
  • Re-refined 3jwm structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3JWM in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3JWM
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3JWM, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3jwm] [3jwm_B] [3jwm_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 3JWM
  • Community annotation for 3JWM at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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