3K23	Transcription	date	Sep 29, 2009
title	Glucocorticoid Receptor With Bound D-Prolinamide 11
authors	K.B.Biggadike, I.M.Mclay, K.P.Madauss, S.P.Williams, R.K.Bledsoe
compound		source
Molecule: Glucocorticoid Receptor Chain: A, B, C Fragment: Unp Residues 521-777, Ligand Binding Domain Synonym: Gr, Nuclear Receptor Subfamily 3 Group C Member 1 Engineered: Yes Mutation: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Grl, Nr3c1 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Phis Gst
Molecule: Nuclear Receptor Coactivator 2 Chain: D, E, F Fragment: Unp Residues 740-751 Synonym: Ncoa-2, Transcriptional Intermediary Factor 2, Hti Engineered: Yes		Synthetic: Yes
symmetry	Space Group: C 1 2 1	R_factor 0.224 R_Free 0.289
crystal cell	length a length b length c angle alpha angle beta angle gamma 184.927 65.956 71.528 90.00 103.64 90.00
method	X-Ray Diffraction	resolution	3.00 Å
ligand	JZN	enzyme
Primary reference	Design and x-ray crystal structures of high-potency nonsteroidal glucocorticoid agonists exploiting a novel binding site on the receptor., Biggadike K, Bledsoe RK, Coe DM, Cooper TW, House D, Iannone MA, Macdonald SJ, Madauss KP, McLay IM, Shipley TJ, Taylor SJ, Tran TB, Uings IJ, Weller V, Williams SP, Proc Natl Acad Sci U S A. 2009 Oct 12. PMID:19822747

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (128 Kb) [Save to disk] Biological Unit Coordinates (3k23.pdb1.gz) 42 Kb Biological Unit Coordinates (3k23.pdb2.gz) 43 Kb Biological Unit Coordinates (3k23.pdb3.gz) 41 Kb LPC: Ligand-Protein Contacts for 3K23 CSU: Contacts of Structural Units for 3K23 Structure Factors (386 Kb) Retrieve 3K23 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3K23 from S2C, [Save to disk] Re-refined 3k23 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3K23 in 3D

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Visual 3D analysis of 3K23

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3K23, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3k23_B] [3k23_A] [3k23_F] [3k23_D] [3k23_C] [3k23] [3k23_E] SWISS-PROT database: [P04150] Domain organization of [GCR_HUMAN] by SWISSPFAM Domain found in 3K23: [HOLI ] by SMART

Other resources with information on 3K23

Community annotation for 3K23 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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