3K34 Lyase Lyase Inhibitor date Oct 01, 2009
title Human Carbonic Anhydrase II With A Sulfonamide Inhibitor
authors C.A.Behnke, I.Le Trong, E.A.Merritt, D.C.Teller, R.E.Stenkamp
compound source
Molecule: Carbonic Anhydrase 2
Chain: A
Synonym: Carbonic Anhydrase II, Ca-II, Carbonate Dehydratas Carbonic Anhydrase C, Cac;
Ec: 4.2.1.1
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Other_details: The Protein Was Purchased From Sigma
symmetry Space Group: P 1 21 1
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
42.045 41.269 71.821 90.00 104.23 90.00
method X-Ray Diffractionresolution 0.90 Å
ligand GOL, HGB, SUA, ZN enzyme Lyase E.C.4.2.1.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceAtomic resolution studies of carbonic anhydrase II., Behnke CA, Le Trong I, Godden JW, Merritt EA, Teller DC, Bajorath J, Stenkamp RE, Acta Crystallogr D Biol Crystallogr. 2010 May;66(Pt 5):616-27. Epub 2010 Apr 21. PMID:20445237
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (101 Kb) [Save to disk]
  • Biological Unit Coordinates (3k34.pdb1.gz) 95 Kb
  • LPC: Ligand-Protein Contacts for 3K34
  • CSU: Contacts of Structural Units for 3K34
  • Structure Factors (2636 Kb)
  • Retrieve 3K34 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3K34 from S2C, [Save to disk]
  • Re-refined 3k34 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3K34 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3K34
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3K34, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3k34_A] [3k34]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 3K34: [Carb_anhydrase ] by SMART
  • Other resources with information on 3K34
  • Community annotation for 3K34 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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