4V7I	Ribosome-SecY complex.	date
authors	Gumbart, J.C., Trabuco, L.G., Schreiner, E., Villa, E., Schulten, K.
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution	9.60
note	4V7I supersedes 3KC4, 3KCR
Gene Ontology	Chain Function Process Component A0 A1 A2 A3 A4 A5 A6 AA AB AC AD AE AF AG AH AI AJ AK AL AM AN AO AP AQ translation repressor activi... AR AS AT AU AV AW AX AY AZ BB BC BD BE BF BG BH BI BJ BK BL BM BN BO BP nuclease activity endonuclease activity endodeoxyribonuclease activi... BQ BR BS BT ornithine decarboxylase inhi... BU
Primary reference	Regulation of the protein-conducting channel by a bound ribosome., Gumbart J, Trabuco LG, Schreiner E, Villa E, Schulten K, Structure. 2009 Nov 11;17(11):1453-64. PMID:19913480

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1624 Kb) [Save to disk] CSU: Contacts of Structural Units for 4V7I Retrieve 4V7I in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 4V7I from S2C, [Save to disk]

View 4V7I in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 4V7I

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4v7i_A6] [4v7i_BJ] [4v7i_A8] [4v7i_AP] [4v7i_BE] [4v7i_BD] [4v7i_BO] [4v7i_A1] [4v7i_BB] [4v7i_A7] [4v7i_BT] [4v7i_BA] [4v7i_A5] [4v7i_BF] [4v7i_AK] [4v7i_A2] [4v7i_AI] [4v7i_BU] [4v7i_BQ] [4v7i_AT] [4v7i_BN] [4v7i_AZ] [4v7i_AO] [4v7i_AS] [4v7i_BG] [4v7i_BK] [4v7i_AX] [4v7i_A0] [4v7i_AR] [4v7i_AM] [4v7i_AN] [4v7i_AA] [4v7i_BP] [4v7i_BH] [4v7i_AE] [4v7i_AJ] [4v7i_AF] [4v7i_AQ] [4v7i_AL] [4v7i_BC] [4v7i_BS] [4v7i_BI] [4v7i_AC] [4v7i_AB] [4v7i_AU] [4v7i_AD] [4v7i] [4v7i_BL] [4v7i_AG] [4v7i_A4] [4v7i_AY] [4v7i_A3] [4v7i_BM] [4v7i_AV] [4v7i_BR] [4v7i_AH] [4v7i_AW] SWISS-PROT database: Domain organization of by SWISSPFAM Domains found in 4V7I: [KH] [KOW] [RL11] [Ribosomal_L14] [Ribosomal_L2] [Ribosomal_L2_C] [Ribosomal_S10] [Ribosomal_S15] [Ribosomal_S4] [S4 ] by SMART

Other resources with information on 4V7I

Community annotation for 4V7I at PDBWiki (http://pdbwiki.org)

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