3KQ7 Transferase date Nov 17, 2009
title Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1- Methylpyrrolidin-2-Yl)Ethyl]Amino}Pyridine-3-Amido)Phenyl]- (Morpholin-4-Yl)Pyridine-4-Carboxamide
authors R.K.Y.Cheng, J.Barker, M.Whittaker
compound source
Molecule: Mitogen-Activated Protein Kinase P38 Alpha
Chain: A
Synonym: Mitogen-Activated Protein Kinase 14, Map Kinase P3 Cytokine Suppressive Anti-Inflammatory Drug-Binding Protein Binding Protein, Csbp, Max-Interacting Protein 2, Map Kinas Sapk2a;
Ec: 2.7.11.24
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Mapk14, Csbp, Csbp1, Csbp2, Cspb1, Mxi2
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet15b
symmetry Space Group: P 21 21 21
R_factor 0.188 R_Free 0.233
crystal
cell
length a length b length c angle alpha angle beta angle gamma
45.427 84.354 125.508 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.80 Å
ligand ACT, KQ7 enzyme Transferase E.C.2.7.11.24 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (71 Kb) [Save to disk]
  • Biological Unit Coordinates (3kq7.pdb1.gz) 65 Kb
  • LPC: Ligand-Protein Contacts for 3KQ7
  • CSU: Contacts of Structural Units for 3KQ7
  • Structure Factors (654 Kb)
  • Retrieve 3KQ7 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3KQ7 from S2C, [Save to disk]
  • Re-refined 3kq7 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3KQ7 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3KQ7
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3KQ7, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3kq7_A] [3kq7]
  • SWISS-PROT database: [Q16539]
  • Domain organization of [MK14_HUMAN] by SWISSPFAM
  • Domain found in 3KQ7: [S_TKc ] by SMART
  • Other resources with information on 3KQ7
  • Community annotation for 3KQ7 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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