3KV0 Transport Protein date Nov 28, 2009
title Crystal Structure Of Het-C2: A Fungal Glycolipid Transfer Pr (Gltp)
authors D.K.Simanshu, R.Kenoth, R.E.Brown, D.J.Patel
compound source
Molecule: Het-C2
Chain: A
Engineered: Yes
Organism_scientific: Podospora Anserina
Organism_taxid: 5145
Gene: Het-C2
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21 (De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet-Sumo
symmetry Space Group: P 41 21 2
R_factor 0.216 R_Free 0.248
crystal
cell
length a length b length c angle alpha angle beta angle gamma
96.926 96.926 57.914 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.90 Å
ligand MLY enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructural determination and tryptophan fluorescence of heterokaryon incompatibility C2 protein (HET-C2), a fungal glycolipid transfer protein (GLTP), provide novel insights into glycolipid specificity and membrane interaction by the GLTP-fold., Kenoth R, Simanshu DK, Kamlekar RK, Pike HM, Molotkovsky JG, Benson LM, Bergen HR 3rd, Prendergast FG, Malinina L, Venyaminov SY, Patel DJ, Brown RE, J Biol Chem. 2010 Feb 17. PMID:20164530
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (41 Kb) [Save to disk]
  • Biological Unit Coordinates (3kv0.pdb1.gz) 35 Kb
  • Biological Unit Coordinates (3kv0.pdb2.gz) 67 Kb
  • LPC: Ligand-Protein Contacts for 3KV0
  • CSU: Contacts of Structural Units for 3KV0
  • Structure Factors (320 Kb)
  • Retrieve 3KV0 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3KV0 from S2C, [Save to disk]
  • Re-refined 3kv0 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3KV0 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3KV0
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3KV0, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3kv0_A] [3kv0]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 3KV0
  • Community annotation for 3KV0 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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