3KXH Transferase Transferase Inhibitor date Dec 03, 2009
title Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In Com The Inhibitor (2-Dymethylammino-4,5,6,7-Tetrabromobenzoimid Acetic Acid (K66)
authors E.Papinutto, C.Franchin, R.Battistutta
compound source
Molecule: Casein Kinase II Subunit Alpha
Chain: A
Fragment: Alpha Subunit
Synonym: Ck2-Alpha, Ck II
Ec: 2.7.11.1
Engineered: Yes
Organism_scientific: Zea Mays
Organism_common: Maize
Organism_taxid: 4577
Gene: Ack2
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Plasmid
symmetry Space Group: C 1 2 1
R_factor 0.212 R_Free 0.266
crystal
cell
length a length b length c angle alpha angle beta angle gamma
143.838 60.411 47.094 90.00 103.93 90.00
method X-Ray Diffractionresolution 1.70 Å
ligand CSO, K66, PEG enzyme Transferase E.C.2.7.11.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceAtp Site-Directed Inhibitors of Protein Kinase Ck2: An Update., Sarno S, Papinutto E, Franchin C, Bain J, Elliott M, Meggio F, Kazimierczuk Z, Orzeszko A, Zanotti G, Battistutta R, Pinna LA, Curr Top Med Chem. 2011 Mar 29. PMID:21513497
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (66 Kb) [Save to disk]
  • Biological Unit Coordinates (3kxh.pdb1.gz) 61 Kb
  • LPC: Ligand-Protein Contacts for 3KXH
  • CSU: Contacts of Structural Units for 3KXH
  • Structure Factors (2223 Kb)
  • Retrieve 3KXH in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3KXH from S2C, [Save to disk]
  • Re-refined 3kxh structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3KXH in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3KXH
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3KXH, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3kxh] [3kxh_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 3KXH: [S_TKc ] by SMART
  • Other resources with information on 3KXH
  • Community annotation for 3KXH at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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