3KXX Transferase date Dec 04, 2009
title Structure Of The Mutant Fibroblast Growth Factor Receptor 1
authors J.H.Bae, T.J.Boggon, F.Tome, V.Mandiyan, I.Lax, J.Schlessinger
compound source
Molecule: Basic Fibroblast Growth Factor Receptor 1
Chain: A, B, C, D
Fragment: Kinase Domain (Unp Residues 458 To 765)
Synonym: Fgfr-1, Bfgf-R, Fms-Like Tyrosine Kinase 2, C-Fgr
Ec: 2.7.10.1
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Fgfr1, Fgfbr, Flg, Flt2
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: C 1 2 1
R_factor 0.222 R_Free 0.263
crystal
cell
length a length b length c angle alpha angle beta angle gamma
186.801 74.290 135.776 90.00 97.41 90.00
method X-Ray Diffractionresolution 3.20 Å
ligand
enzyme Transferase E.C.2.7.10.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B


Primary referenceAsymmetric receptor contact is required for tyrosine autophosphorylation of fibroblast growth factor receptor in living cells., Bae JH, Boggon TJ, Tome F, Mandiyan V, Lax I, Schlessinger J, Proc Natl Acad Sci U S A. 2010 Feb 16;107(7):2866-71. Epub 2010 Jan 26. PMID:20133753
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (192 Kb) [Save to disk]
  • Biological Unit Coordinates (3kxx.pdb1.gz) 51 Kb
  • Biological Unit Coordinates (3kxx.pdb2.gz) 51 Kb
  • Biological Unit Coordinates (3kxx.pdb3.gz) 47 Kb
  • Biological Unit Coordinates (3kxx.pdb4.gz) 48 Kb
  • Biological Unit Coordinates (3kxx.pdb5.gz) 96 Kb
  • Biological Unit Coordinates (3kxx.pdb6.gz) 95 Kb
  • CSU: Contacts of Structural Units for 3KXX
  • Structure Factors (225 Kb)
  • Retrieve 3KXX in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3KXX from S2C, [Save to disk]
  • Re-refined 3kxx structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3KXX in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3KXX
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3KXX, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3kxx_B] [3kxx_A] [3kxx_D] [3kxx_C] [3kxx]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 3KXX: [TyrKc ] by SMART
  • Other resources with information on 3KXX
  • Community annotation for 3KXX at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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