3KZI Electron Transport date Dec 08, 2009
title Crystal Structure Of Monomeric Form Of Cyanobacterial Photos
authors A.Gabdulkhakov, A.Guskov, M.Broser, J.Kern, A.Zouni, W.Saenger
compound source
Molecule: Photosystem Q(B) Protein 1
Chain: A
Synonym: 32 Kda Thylakoid Membrane Protein 1, Photosystem I D1 1;
 Organism_scientific: Thermosynechococcus Elongatus
Organism_taxid: 197221
Strain: Bp-1

Molecule: Photosystem II Core Light Harvesting Protein
Chain: B
Organism_scientific: Thermosynechococcus Elongatus
Organism_taxid: 197221
Strain: Bp-1

Molecule: Photosystem II Cp43 Protein
Chain: C
Organism_scientific: Thermosynechococcus Elongatus
Organism_taxid: 197221
Strain: Bp-1

Molecule: Photosystem II D2 Protein
Chain: D
Synonym: Photosystem II Reaction Center D2 Protein, Psii D2 Photosystem Q(A) Protein;
Organism_scientific: Thermosynechococcus Elongatus
Organism_taxid: 197221
Strain: Bp-1

Molecule: Cytochrome B559 Subunit Alpha
Chain: E
Synonym: Psii Reaction Center Subunit V
Organism_scientific: Thermosynechococcus Elongatus
Organism_taxid: 197221
Strain: Bp-1

Molecule: Cytochrome B559 Subunit Beta
Chain: F
Synonym: Psii Reaction Center Subunit Vi
Organism_scientific: Thermosynechococcus Elongatus
Organism_taxid: 197221
Strain: Bp-1

Molecule: Photosystem II Reaction Center Protein H
Chain: H
Synonym: Psii-H
Organism_scientific: Thermosynechococcus Elongatus
Organism_taxid: 197221
Strain: Bp-1

Molecule: Photosystem II Reaction Center Protein I
Chain: I
Synonym: Psii-I, Psii 4.4 Kda Protein
Organism_scientific: Thermosynechococcus Elongatus
Organism_taxid: 197221
Strain: Bp-1

Molecule: Photosystem II Reaction Center Protein J
Chain: J
Synonym: Psii-J
Organism_scientific: Thermosynechococcus Elongatus
Organism_taxid: 197221
Strain: Bp-1

Molecule: Photosystem II Reaction Center Protein K
Chain: K
Synonym: Psii-K
Organism_scientific: Thermosynechococcus Elongatus
Organism_taxid: 197221
Strain: Bp-1

Molecule: Photosystem II Reaction Center Protein L
Chain: L
Synonym: Psii-L, Psii 5 Kda Protein
Organism_scientific: Thermosynechococcus Elongatus
Organism_taxid: 197221
Strain: Bp-1

Molecule: Photosystem II Reaction Center Protein M
Chain: M
Synonym: Psii-M
Organism_scientific: Thermosynechococcus Elongatus
Organism_taxid: 197221
Strain: Bp-1

Molecule: Photosystem II Manganese-Stabilizing Polypeptide
Chain: O
Synonym: Msp
Organism_scientific: Thermosynechococcus Elongatus
Organism_taxid: 197221
Strain: Bp-1

Molecule: Photosystem II Reaction Center Protein T
Chain: T
Synonym: Psii-T, Psii-Tc
Organism_scientific: Thermosynechococcus Elongatus
Organism_taxid: 197221
Strain: Bp-1

Molecule: Photosystem II 12 Kda Extrinsic Protein
Chain: U
Synonym: Ps II Complex 12 Kda Extrinsic Protein, Psii-U
Organism_scientific: Thermosynechococcus Elongatus
Organism_taxid: 197221
Strain: Bp-1

Molecule: Cytochrome C-550
Chain: V
Synonym: Cytochrome C550, Low-Potential Cytochrome C, Cytoc 549;
Organism_scientific: Thermosynechococcus Elongatus
Organism_taxid: 197221
Strain: Bp-1

Molecule: Photosystem II Reaction Center Protein Ycf12
Chain: y
Synonym: Protein Ycf12
Organism_scientific: Thermosynechococcus Elongatus
Organism_taxid: 197221
Strain: Bp-1

Molecule: Photosystem II Reaction Center X Protein
Chain: X
Synonym: Photosystem II Psbx Protein
Organism_scientific: Thermosynechococcus Elongatus
Organism_taxid: 197221
Strain: Bp-1

Molecule: Photosystem II Reaction Center Protein Z
Chain: Z
Synonym: Psii-Z
Organism_scientific: Thermosynechococcus Elongatus
Organism_taxid: 197221
Strain: Bp-1
symmetry Space Group: C 2 2 21
R_factor 0.297 R_Free 0.308
crystal
cell
length a length b length c angle alpha angle beta angle gamma
119.890 224.690 337.280 90.00 90.00 90.00
method X-Ray Diffractionresolution 3.60 Å
ligand BCR, BCT, CA, CLA, DGD, FE2, HEM, LHG, LMG, LMT, MES, OEC, PHO, PL9, SQD enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


B


C


D


E


F


H


I


J


K


L


M


O
  • oxygen evolving activity


    • T


    U


    V


    X


    Z


    y


    Primary referenceCrystal structure of monomeric photosystem II from Thermosynechococcus elongatus at 3.6 A resolution., Broser M, Gabdulkhakov A, Kern J, Guskov A, Mueh F, Saenger W, Zouni A, J Biol Chem. 2010 Jun 17. PMID:20558739
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (521 Kb) [Save to disk]
  • Biological Unit Coordinates (3kzi.pdb1.gz) 484 Kb
  • LPC: Ligand-Protein Contacts for 3KZI
  • CSU: Contacts of Structural Units for 3KZI
  • Structure Factors (470 Kb)
  • Retrieve 3KZI in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3KZI from S2C, [Save to disk]
  • Re-refined 3kzi structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
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  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3KZI, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3kzi_F] [3kzi_B] [3kzi_I] [3kzi_K] [3kzi_T] [3kzi_y] [3kzi] [3kzi_L] [3kzi_Z] [3kzi_V] [3kzi_M] [3kzi_X] [3kzi_H] [3kzi_D] [3kzi_J] [3kzi_C] [3kzi_U] [3kzi_A] [3kzi_O] [3kzi_E]
  • SWISS-PROT database:
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