3L9K	Motor Protein	date	Jan 05, 2010
title	Insights Into Dynein Assembly From A Dynein Intermediate Cha Chain Roadblock Structure
authors	J.Hall, P.A.Karplus, E.Barbar
compound		source
Molecule: Re64145p Chain: A, B, C, D Synonym: Roadblock Engineered: Yes		Organism_scientific: Drosophila Melanogaster Organism_common: Fruit Fly Organism_taxid: 7227 Gene: Robl, Cg10751, Dmel_cg10751 Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet15da
Molecule: Dynein Intermediate Chain, Cytosolic Chain: W, X, Y, Z Synonym: Dh Ic, Cytoplasmic Dynein Intermediate Chain, Prot Wing; Engineered: Yes		Organism_scientific: Drosophila Melanogaster Organism_common: Fruit Fly Organism_taxid: 7227 Gene: Sw, Cdic, Dic19b, Cg18000 Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet15da
symmetry	Space Group: P 32	R_factor 0.227 R_Free 0.249
crystal cell	length a length b length c angle alpha angle beta angle gamma 107.180 107.180 65.410 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	3.00 Å
Gene	DMEL
Gene Ontology	Chain Function Process Component A, D, C, B

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (179 Kb) [Save to disk] Biological Unit Coordinates (3l9k.pdb1.gz) 44 Kb Biological Unit Coordinates (3l9k.pdb2.gz) 44 Kb Biological Unit Coordinates (3l9k.pdb3.gz) 44 Kb Biological Unit Coordinates (3l9k.pdb4.gz) 44 Kb Biological Unit Coordinates (3l9k.pdb5.gz) 87 Kb Biological Unit Coordinates (3l9k.pdb6.gz) 87 Kb CSU: Contacts of Structural Units for 3L9K Structure Factors (1048 Kb) Retrieve 3L9K in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3L9K from S2C, [Save to disk] Re-refined 3l9k structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3L9K in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3L9K

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3L9K, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3l9k_Z] [3l9k] [3l9k_D] [3l9k_B] [3l9k_A] [3l9k_W] [3l9k_Y] [3l9k_C] [3l9k_X] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 3L9K: [Robl_LC7 ] by SMART

Other resources with information on 3L9K

Community annotation for 3L9K at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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Images from IMB Jena Image Library of Biological Macromolecules.

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