3LBG	Oxidoreductase	date	Jan 08, 2010
title	Urate Oxidase Complexed With 8-Thio Xanthine
authors	T.Prange, N.Colloc'H, L.Gabison
compound		source
Molecule: Uricase Chain: A Fragment: Unp Residues 2-296 Synonym: Urate Oxidase Ec: 1.7.3.3 Engineered: Yes		Organism_scientific: Aspergillus Flavus Organism_taxid: 5059 Expression_system: Saccharomyces Cerevisiae Expression_system_taxid: 4932
symmetry	Space Group: I 2 2 2	R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma 79.637 95.471 104.610 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.50 Å
ligand	8TX, ACE, EDO, NA, TRS	enzyme	Oxidoreductase E.C.1.7.3.3 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	Near-atomic resolution structures of urate oxidase complexed with its substrate and analogues: the protonation state of the ligand., Gabison L, Chiadmi M, El Hajji M, Castro B, Colloc'h N, Prange T, Acta Crystallogr D Biol Crystallogr. 2010 Jun;66(Pt 6):714-24. Epub 2010 May 15. PMID:20516624

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (60 Kb) [Save to disk] Biological Unit Coordinates (3lbg.pdb1.gz) 215 Kb LPC: Ligand-Protein Contacts for 3LBG CSU: Contacts of Structural Units for 3LBG Structure Factors (559 Kb) Retrieve 3LBG in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3LBG from S2C, [Save to disk] Re-refined 3lbg structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3LBG in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3LBG

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3LBG, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3lbg] [3lbg_A] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 3LBG

Community annotation for 3LBG at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---