3LC3	Hydrolase Hydrolase Inhibitor	date	Jan 09, 2010
title	Benzothiophene Inhibitors Of Factor Ixa
authors	S.Wang, R.Beck
compound		source
Molecule: Coagulation Factor Ix Chain: A, C Fragment: Residues 227-461 Synonym: Christmas Factor, Plasma Thromboplastin Component, Ptc, Coagulation Factor Ixa Light Chain, Coagulation Factor Ixa Heavy Chain; Ec: 3.4.21.22 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: F9 Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: Coagulation Factor Ix Chain: B, D Fragment: Residues 133-188 Synonym: Christmas Factor, Plasma Thromboplastin Component, Ptc, Coagulation Factor Ixa Light Chain, Coagulation Factor Ixa Heavy Chain; Ec: 3.4.21.22 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: F9 Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: P 1 21 1	R_factor 0.197 R_Free 0.260
crystal cell	length a length b length c angle alpha angle beta angle gamma 66.922 96.035 44.391 90.00 89.93 90.00
method	X-Ray Diffraction	resolution	1.90 Å
ligand	CA, IYX BindingDB	enzyme	Hydrolase E.C.3.4.21.22 BRENDA
Gene Ontology	Chain Function Process Component A, C D, B
Primary reference	Studies of Benzothiophene Template as Potent Factor IXa (FIXa) Inhibitors in Thrombosis., Wang S, Beck R, Blench T, Burd A, Buxton S, Malic M, Ayele T, Shaikh S, Chahwala S, Chander C, Holland R, Merette S, Zhao L, Blackney M, Watts A, J Med Chem. 2010 Feb 25;53(4):1465-72. PMID:20121198

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (109 Kb) [Save to disk] Biological Unit Coordinates (3lc3.pdb1.gz) 53 Kb Biological Unit Coordinates (3lc3.pdb2.gz) 53 Kb LPC: Ligand-Protein Contacts for 3LC3 CSU: Contacts of Structural Units for 3LC3 Structure Factors (2203 Kb) Retrieve 3LC3 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3LC3 from S2C, [Save to disk] Re-refined 3lc3 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3LC3 in 3D

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Visual 3D analysis of 3LC3

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3LC3, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3lc3_D] [3lc3_C] [3lc3_A] [3lc3] [3lc3_B] SWISS-PROT database: Domain organization of by SWISSPFAM Domains found in 3LC3: [EGF] [Tryp_SPc ] by SMART

Other resources with information on 3LC3

Community annotation for 3LC3 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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