3LFD	Transferase	date	Jan 16, 2010
title	Human P38 Map Kinase In Complex With Rl113
authors	C.Gruetter, J.R.Simard, M.Getlik, D.Rauh
compound		source
Molecule: Mitogen-Activated Protein Kinase 14 Chain: A Synonym: Mitogen-Activated Protein Kinase P38 Alpha, Map Ki Alpha, Cytokine Suppressive Anti-Inflammatory Drug-Binding Csaid-Binding Protein, Csbp, Max-Interacting Protein 2, Map Mxi2, Sapk2a; Ec: 2.7.11.24 Engineered: Yes Mutation: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Mapk14, Csbp, Csbp1, Csbp2, Cspb1, Mxi2 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pgex 6p-1
symmetry	Space Group: P 21 21 21	R_factor 0.222 R_Free 0.305
crystal cell	length a length b length c angle alpha angle beta angle gamma 67.950 69.850 74.710 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	3.40 Å
ligand	BOG, Z85 BindingDB	enzyme	Transferase E.C.2.7.11.24 BRENDA
Gene Ontology	Chain Function Process Component A

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (59 Kb) [Save to disk] Biological Unit Coordinates (3lfd.pdb1.gz) 54 Kb LPC: Ligand-Protein Contacts for 3LFD CSU: Contacts of Structural Units for 3LFD Structure Factors (43 Kb) Retrieve 3LFD in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3LFD from S2C, [Save to disk] Re-refined 3lfd structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3LFD in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3LFD

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3LFD, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3lfd] [3lfd_A] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 3LFD: [S_TKc ] by SMART

Other resources with information on 3LFD

Community annotation for 3LFD at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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