3LNN Metal Transport date Feb 02, 2010
title Crystal Structure Of Zneb From Cupriavidus Metallidurans
authors J.K.Lee, F.De Angelis, L.J.Miercke, R.M.Stroud, G.Vandenbussche, For Structures Of Membrane Proteins (Csmp)
compound source
Molecule: Membrane Fusion Protein (Mfp) Heavy Metal Cation Zneb (Czcb-Like);
Chain: A, B
Synonym: Secretion Protein Hlyd
Engineered: Yes
Organism_scientific: Cupriavidus Metallidurans
Organism_taxid: 266264
Strain: Ch34
Gene: Rmet_5330, Zneb
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet30b
symmetry Space Group: I 41 2 2
R_factor 0.237 R_Free 0.314
crystal
cell
length a length b length c angle alpha angle beta angle gamma
137.111 137.111 202.898 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.80 Å
ligand ZN enzyme
Gene RMET
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceMetal-induced conformational changes in ZneB suggest an active role of membrane fusion proteins in efflux resistance systems., De Angelis F, Lee JK, O'Connell JD 3rd, Miercke LJ, Verschueren KH, Srinivasan V, Bauvois C, Govaerts C, Robbins RA, Ruysschaert JM, Stroud RM, Vandenbussche G, Proc Natl Acad Sci U S A. 2010 Jun 15;107(24):11038-43. Epub 2010 Jun 1. PMID:20534468
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (190 Kb) [Save to disk]
  • Biological Unit Coordinates (3lnn.pdb1.gz) 108 Kb
  • Biological Unit Coordinates (3lnn.pdb2.gz) 78 Kb
  • Biological Unit Coordinates (3lnn.pdb3.gz) 362 Kb
  • Biological Unit Coordinates (3lnn.pdb4.gz) 722 Kb
  • LPC: Ligand-Protein Contacts for 3LNN
  • CSU: Contacts of Structural Units for 3LNN
  • Structure Factors (393 Kb)
  • Retrieve 3LNN in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3LNN from S2C, [Save to disk]
  • Re-refined 3lnn structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3LNN in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3LNN
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3LNN, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3lnn] [3lnn_B] [3lnn_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 3LNN
  • Community annotation for 3LNN at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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