3M1S Transferase Transferase Inhibitor date Mar 05, 2010
title Structure Of Ruthenium Half-Sandwich Complex Bound To Glycog Synthase Kinase 3
authors G.E.Atilla-Gokcumen, L.Di Costanzo, G.Zimmermann, E.Meggers
compound source
Molecule: Glycogen Synthase Kinase-3 Beta
Chain: A, B
Synonym: Gsk-3 Beta
Ec: 2.7.11.26
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Gsk3b
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 21 21 21
R_factor 0.169 R_Free 0.228
crystal
cell
length a length b length c angle alpha angle beta angle gamma
83.041 86.114 177.398 90.00 90.00 90.00
method X-Ray Diffractionresolution 3.13 Å
ligand DW1 enzyme Transferase E.C.2.7.11.26 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B
  • protein serine/threonine kin...
  • excitatory postsynaptic pote...
  • positive regulation of mitoc...
  • beta-catenin destruction com...
  • Primary referenceStructure of anticancer ruthenium half-sandwich complex bound to glycogen synthase kinase 3beta., Atilla-Gokcumen GE, Di Costanzo L, Meggers E, J Biol Inorg Chem. 2010 Sep 7. PMID:20821241
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (119 Kb) [Save to disk]
  • Biological Unit Coordinates (3m1s.pdb1.gz) 113 Kb
  • LPC: Ligand-Protein Contacts for 3M1S
  • CSU: Contacts of Structural Units for 3M1S
  • Structure Factors (328 Kb)
  • Retrieve 3M1S in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3M1S from S2C, [Save to disk]
  • Re-refined 3m1s structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3M1S in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3M1S
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3M1S, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3m1s_B] [3m1s] [3m1s_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 3M1S: [S_TKc ] by SMART
  • Other resources with information on 3M1S
  • Community annotation for 3M1S at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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