3MA3	Transferase	date	Mar 23, 2010
title	Crystal Structure Of Human Proto-Oncogene Serine Threonine K (Pim1) In Complex With A Consensus Peptide And A Naphtho-Di Ligand
authors	P.Filippakopoulos, A.Bullock, O.Fedorov, M.Vollmar, F.Von Delft, C.H.Arrowsmith, A.M.Edwards, C.Bountra, S.Knapp, Structural Gen Consortium (Sgc)
compound		source
Molecule: Proto-Oncogene Serinethreonine-Protein Kinase Pi Chain: A Fragment: Unp Residues 92-403 Ec: 2.7.11.1 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Pim1 Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3)-R3 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pnic28-Bsa4
Molecule: Pimtide Chain: B Synonym: Consensus Pim1 Substrate Peptide Engineered: Yes		Synthetic: Yes
symmetry	Space Group: P 65	R_factor 0.169 R_Free 0.233
crystal cell	length a length b length c angle alpha angle beta angle gamma 97.707 97.707 80.581 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	2.30 Å
ligand	01I, SEP	enzyme	Transferase E.C.2.7.11.1 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	New potent dual inhibitors of CK2 and Pim kinases: discovery and structural insights., Lopez-Ramos M, Prudent R, Moucadel V, Sautel CF, Barette C, Lafanechere L, Mouawad L, Grierson D, Schmidt F, Florent JC, Filippakopoulos P, Bullock AN, Knapp S, Reiser JB, Cochet C, FASEB J. 2010 Sep;24(9):3171-85. Epub 2010 Apr 16. PMID:20400536

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (100 Kb) [Save to disk] Biological Unit Coordinates (3ma3.pdb1.gz) 94 Kb LPC: Ligand-Protein Contacts for 3MA3 CSU: Contacts of Structural Units for 3MA3 Structure Factors (419 Kb) Retrieve 3MA3 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3MA3 from S2C, [Save to disk] Re-refined 3ma3 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3MA3 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3MA3

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3MA3, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1e3ma3, region A:117-269 [Jmol] [rasmolscript] [script source]     - Domain d1v3ma3, region A:407-496 [Jmol] [rasmolscript] [script source]

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3ma3] [3ma3_A] [3ma3_B] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 3MA3: [S_TKc ] by SMART

Other resources with information on 3MA3

Community annotation for 3MA3 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---