3MFS Transferase date Apr 03, 2010
title Cask-4m Cam Kinase Domain, Amppnp
authors M.C.Wahl, K.Mukherjee
compound source
Molecule: Peripheral Plasma Membrane Protein Cask
Chain: A
Fragment: Cask-4m Cam Kinase Domain, Rersidues 1-337
Synonym: Hcask, Calciumcalmodulin-Dependent Serine Protein Protein Lin-2 Homolog;
Ec: 2.7.11.1
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Cask, Lin2
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pgex
symmetry Space Group: P 21 21 21
R_factor 0.219 R_Free 0.268
crystal
cell
length a length b length c angle alpha angle beta angle gamma
59.006 62.157 97.899 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.10 Å
ligand ANP enzyme Transferase E.C.2.7.11.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceEvolution of CASK into a Mg2+-sensitive kinase., Mukherjee K, Sharma M, Jahn R, Wahl MC, Sudhof TC, Sci Signal. 2010 Apr 27;3(119):ra33. PMID:20424264
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (58 Kb) [Save to disk]
  • Biological Unit Coordinates (3mfs.pdb1.gz) 52 Kb
  • LPC: Ligand-Protein Contacts for 3MFS
  • CSU: Contacts of Structural Units for 3MFS
  • Structure Factors (170 Kb)
  • Retrieve 3MFS in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3MFS from S2C, [Save to disk]
  • Re-refined 3mfs structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3MFS in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3MFS
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3MFS, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3mfs] [3mfs_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 3MFS: [S_TKc ] by SMART
  • Other resources with information on 3MFS
  • Community annotation for 3MFS at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science