3MIW	Viral Protein	date	Apr 12, 2010
title	Crystal Structure Of Rotavirus Nsp4
authors	A.R.Chacko, R.J.Read, E.J.Dodson, D.C.Rao, K.Suguna
compound		source
Molecule: Non-Structural Glycoprotein 4 Chain: B, C, E, G, I, A, D, F, H, J Fragment: Diarrhea-Inducing Domain (Unp Residues 95-146) Synonym: Nsp4, Ncvp5, Ns28 Engineered: Yes		Organism_scientific: Human Rotavirus G4 Organism_common: Rv-A Organism_taxid: 10960 Strain: Strain St. Thomas 3 Gene: G10 Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21 De3 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet22b+
symmetry	Space Group: P 42	R_factor 0.261 R_Free 0.297
crystal cell	length a length b length c angle alpha angle beta angle gamma 63.463 63.463 123.209 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.50 Å
ligand	EDO	enzyme
Primary reference	A new pentameric structure of rotavirus NSP4 revealed by molecular replacement., Chacko AR, Jeyakanthan J, Ueno G, Sekar K, Rao CD, Dodson EJ, Suguna K, Read RJ, Acta Crystallogr D Biol Crystallogr. 2012 Jan;68(Pt 1):57-61. Epub 2011 Dec 9. PMID:22194333

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (78 Kb) [Save to disk] Biological Unit Coordinates (3miw.pdb1.gz) 36 Kb Biological Unit Coordinates (3miw.pdb2.gz) 36 Kb LPC: Ligand-Protein Contacts for 3MIW CSU: Contacts of Structural Units for 3MIW Structure Factors (118 Kb) Retrieve 3MIW in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3MIW from S2C, [Save to disk] Re-refined 3miw structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3MIW in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3MIW

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3MIW, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3miw_H] [3miw_B] [3miw] [3miw_C] [3miw_G] [3miw_F] [3miw_D] [3miw_J] [3miw_A] [3miw_E] [3miw_I] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 3MIW

Community annotation for 3MIW at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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