3MNS Hydrolase date Apr 22, 2010
title Investigation Of Global And Local Effects Of Radiation Damag Porcine Pancreatic Elastase. Third Stage Of Radiation Damag
authors T.Petrova, S.Ginell, Y.Kim, G.Joachimiak, A.Joachimiak
compound source
Molecule: Chymotrypsin-Like Elastase Family Member 1
Chain: A
Synonym: Elastase-1
Ec: 3.4.21.36
 Organism_scientific: Sus Scrofa
Organism_common: Pigs,Swine,Wild Boar
Organism_taxid: 9823
symmetry Space Group: P 21 21 21
R_factor 0.140 R_Free 0.168
crystal
cell
length a length b length c angle alpha angle beta angle gamma
50.169 57.782 74.543 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.50 Å
ligand NA, SO4 enzyme Hydrolase E.C.3.4.21.36 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceX-ray-induced deterioration of disulfide bridges at atomic resolution., Petrova T, Ginell S, Mitschler A, Kim Y, Lunin VY, Joachimiak G, Cousido-Siah A, Hazemann I, Podjarny A, Lazarski K, Joachimiak A, Acta Crystallogr D Biol Crystallogr. 2010 Oct;66(Pt 10):1075-91. Epub 2010, Sep 18. PMID:20944241
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (56 Kb) [Save to disk]
  • Biological Unit Coordinates (3mns.pdb1.gz) 52 Kb
  • LPC: Ligand-Protein Contacts for 3MNS
  • CSU: Contacts of Structural Units for 3MNS
  • Structure Factors (446 Kb)
  • Retrieve 3MNS in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3MNS from S2C, [Save to disk]
  • Re-refined 3mns structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3MNS in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 3MNS
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3MNS, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3mns_A] [3mns]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 3MNS: [Tryp_SPc ] by SMART
    • Other resources with information on 3MNS
  • Community annotation for 3MNS at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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