3MOL Heme Binding Protein, Transport Protein date Apr 22, 2010
title Structure Of Dimeric Holo Hasap H32a Mutant From Pseudomonas Aeruginosa To 1.20a Resolution
authors S.Lovell, K.P.Battaile, G.Jepkorir, J.C.Rodriguez, H.Rui, W.Im, A.Y.Alontaga, E.Yukl, P.Moenne-Loccoz, M.Rivera
compound source
Molecule: Heme Acquisition Protein Hasap
Chain: A, B
Fragment: Unp Residues 1-184
Engineered: Yes
Mutation: Yes
Organism_scientific: Pseudomonas Aeruginosa
Organism_taxid: 208964
Strain: Pao1
Gene: Hasap, Pa14_20020
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21-Gold (De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet11a
symmetry Space Group: I 1 2 1
R_factor 0.177 R_Free 0.197
crystal
cell
length a length b length c angle alpha angle beta angle gamma
71.740 52.700 85.714 90.00 91.48 90.00
method X-Ray Diffractionresolution 1.20 Å
ligand HEM enzyme
note 3MOL is a representative structure
Gene PA14
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceStructural, NMR Spectroscopic, and Computational Investigation of Hemin Loading in the Hemophore HasAp from Pseudomonas aeruginosa., Jepkorir G, Rodriguez JC, Rui H, Im W, Lovell S, Battaile KP, Alontaga AY, Yukl ET, Moenne-Loccoz P, Rivera M, J Am Chem Soc. 2010 Jun 24. PMID:20572666
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (123 Kb) [Save to disk]
  • Biological Unit Coordinates (3mol.pdb1.gz) 113 Kb
  • LPC: Ligand-Protein Contacts for 3MOL
  • CSU: Contacts of Structural Units for 3MOL
  • Structure Factors (1300 Kb)
  • Retrieve 3MOL in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3MOL from S2C, [Save to disk]
  • Re-refined 3mol structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3MOL in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3MOL
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3MOL, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3mol] [3mol_A] [3mol_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 3MOL
  • Community annotation for 3MOL at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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