3MP1	Histone Binding Protein	date	Apr 24, 2010
title	Complex Structure Of Sgf29 And Trimethylated H3k4
authors	J.Li, J.Ruan, M.Wu, X.Xue, J.Zang
compound		source
Molecule: Maltose-Binding Periplasmic Protein,Linker,Saga-A Factor 29; Chain: A Synonym: Mbp,Sgf29 Engineered: Yes Other_details: Chimera Of Maltose-Binding Periplasmic Prote Associated Factor;		Organism_scientific: Escherichia Coli K-12, Unidentified, Saccharomyces Cerevisiae S288c; Organism_taxid: 83333, 32644, 559292 Strain: K12, S288c Gene: Male, Sgf29 Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_strain: Bl21 (De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet23b
Molecule: H3k4me3 Peptide Chain: P Engineered: Yes		Synthetic: Yes Organism_scientific: Synthetic Construct Organism_taxid: 32630 Other_details: Synthetic Peptide
symmetry	Space Group: P 21 21 21	R_factor 0.223 R_Free 0.260
crystal cell	length a length b length c angle alpha angle beta angle gamma 50.238 84.845 119.150 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.60 Å
ligand	ACT, GLC, M3L	enzyme
Gene Ontology	Chain Function Process Component A carbohydrate transmembrane t...
Primary reference	Sgf29 binds histone H3K4me2/3 and is required for SAGA complex recruitment and histone H3 acetylation., Bian C, Xu C, Ruan J, Lee KK, Burke TL, Tempel W, Barsyte D, Li J, Wu M, Zhou BO, Fleharty BE, Paulson A, Allali-Hassani A, Zhou JQ, Mer G, Grant PA, Workman JL, Zang J, Min J, EMBO J. 2011 Jun 17. doi: 10.1038/emboj.2011.193. PMID:21685874

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (89 Kb) [Save to disk] Biological Unit Coordinates (3mp1.pdb1.gz) 84 Kb LPC: Ligand-Protein Contacts for 3MP1 CSU: Contacts of Structural Units for 3MP1 Structure Factors (128 Kb) Retrieve 3MP1 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3MP1 from S2C, [Save to disk] Re-refined 3mp1 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3MP1 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3MP1

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3MP1, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3mp1_P] [3mp1] [3mp1_A] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 3MP1

Community annotation for 3MP1 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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