3MPT	Transferase Transferase Inhibitor	date	Apr 27, 2010
title	Crystal Structure Of P38 Kinase In Complex With A Pyrrole-2- Carboxamide Inhibitor
authors	D.O.Somers
compound		source
Molecule: Mitogen-Activated Protein Kinase 14 Chain: A Synonym: Map Kinase 14, Mapk 14, Mitogen-Activated Protein Alpha, Map Kinase P38 Alpha, Cytokine Suppressive Anti-Infl Drug-Binding Protein, Csaid-Binding Protein, Csbp, Max-Inte Protein 2, Map Kinase Mxi2, Sapk2a; Ec: 2.7.11.24 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Mapk14, Csbp, Csbp1, Csbp2, Cspb1, Mxi2 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Brl Expression_system_vector_type: Plasmid Expression_system_plasmid: Prseta
symmetry	Space Group: P 21 21 21	R_factor 0.236 R_Free 0.298
crystal cell	length a length b length c angle alpha angle beta angle gamma 45.376 85.859 124.463 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.89 Å
ligand	1GK, GOL	enzyme	Transferase E.C.2.7.11.24 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	The discovery and initial optimisation of pyrrole-2-carboxamides as inhibitors of p38alpha MAP kinase., Down K, Bamborough P, Alder C, Campbell A, Christopher JA, Gerelle M, Ludbrook S, Mallett D, Mellor G, Miller DD, Pearson R, Ray K, Solanke Y, Somers D, Bioorg Med Chem Lett. 2010 May 10. PMID:20570148

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (68 Kb) [Save to disk] Biological Unit Coordinates (3mpt.pdb1.gz) 63 Kb LPC: Ligand-Protein Contacts for 3MPT CSU: Contacts of Structural Units for 3MPT Structure Factors (278 Kb) Retrieve 3MPT in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3MPT from S2C, [Save to disk] Re-refined 3mpt structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3MPT in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3MPT

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3MPT, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3mpt_A] [3mpt] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 3MPT: [S_TKc ] by SMART

Other resources with information on 3MPT

Community annotation for 3MPT at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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