3MV5	Transferase	date	May 03, 2010
title	Crystal Structure Of Akt-1-Inhibitor Complexes
authors	J.Pandit
compound		source
Molecule: V-Akt Murine Thymoma Viral Oncogene Homolog 1 (Ak Chain: A Fragment: Kinase Domain Ec: 2.7.11.1 Engineered: Yes Mutation: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Akt-1, Akt1 Expression_system: Spodoptera Frugiperda Expression_system_taxid: 7108 Expression_system_strain: Sf9
Molecule: Gsk3-Beta Peptide Chain: C Fragment: 10 Residue Peptide From Gsk3-B (Residues 3-12) Engineered: Yes		Synthetic: Yes
symmetry	Space Group: P 1 21 1	R_factor 0.200 R_Free 0.282
crystal cell	length a length b length c angle alpha angle beta angle gamma 42.706 55.417 93.287 90.00 104.00 90.00
method	X-Ray Diffraction	resolution	2.47 Å
ligand	MN, TPO, XFE BindingDB	enzyme	Transferase E.C.2.7.11.1 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	Design of Selective, ATP-Competitive Inhibitors of Akt., Freeman-Cook KD, Autry C, Borzillo G, Gordon D, Barbacci-Tobin E, Bernardo V, Briere D, Clark T, Corbett M, Jakubczak J, Kakar S, Knauth E, Lippa B, Luzzio MJ, Mansour M, Martinelli G, Marx M, Nelson K, Pandit J, Rajamohan F, Robinson S, Subramanyam C, Wei L, Wythes M, Morris J, J Med Chem. 2010 May 19. PMID:20481595

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (61 Kb) [Save to disk] Biological Unit Coordinates (3mv5.pdb1.gz) 55 Kb LPC: Ligand-Protein Contacts for 3MV5 CSU: Contacts of Structural Units for 3MV5 Structure Factors (581 Kb) Retrieve 3MV5 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3MV5 from S2C, [Save to disk] Re-refined 3mv5 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3MV5 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3MV5

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3MV5, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3mv5_C] [3mv5] [3mv5_A] SWISS-PROT database: Domain organization of by SWISSPFAM Domains found in 3MV5: [S_TK_X] [S_TKc ] by SMART

Other resources with information on 3MV5

Community annotation for 3MV5 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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