3MVL	Transferase	date	May 04, 2010
title	P38 Alpha Map Kinase Complexed With Pyrrolotriazine Inhibito
authors	J.S.Sack
compound		source
Molecule: Mitogen-Activated Protein Kinase 14 Chain: A, B Synonym: Map Kinase 14, Mapk 14, Mitogen-Activated Protein Alpha, Map Kinase P38 Alpha, Cytokine Suppressive Anti-Infl Drug-Binding Protein, Csaid-Binding Protein, Csbp, Max-Inte Protein 2, Map Kinase Mxi2, Sapk2a; Ec: 2.7.11.24 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Csbp, Csbp1, Csbp2, Cspb1, Mapk14, Mxi2 Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_cell_line: Bl21 De3 Expression_system_vector_type: Plasmid
symmetry	Space Group: P 1 21 1	R_factor 0.227 R_Free 0.335
crystal cell	length a length b length c angle alpha angle beta angle gamma 67.540 71.680 72.820 90.00 90.01 90.00
method	X-Ray Diffraction	resolution	2.80 Å
ligand	38P BindingDB	enzyme	Transferase E.C.2.7.11.24 BRENDA
Gene Ontology	Chain Function Process Component A, B
Primary reference	Discovery of 4-(5-(cyclopropylcarbamoyl)-2-methylphenylamino)-5-methyl-N-propylpyrrolo[ 1,2-f][1,2,4]triazine-6-carboxamide (BMS-582949), a clinical p38alpha MAP kinase inhibitor for the treatment of inflammatory diseases., Liu C, Lin J, Wrobleski ST, Lin S, Hynes J, Wu H, Dyckman AJ, Li T, Wityak J, Gillooly KM, Pitt S, Shen DR, Zhang RF, McIntyre KW, Salter-Cid L, Shuster DJ, Zhang H, Marathe PH, Doweyko AM, Sack JS, Kiefer SE, Kish KF, Newitt JA, McKinnon M, Dodd JH, Barrish JC, Schieven GL, Leftheris K, J Med Chem. 2010 Sep 23;53(18):6629-39. PMID:20804198

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (118 Kb) [Save to disk] Biological Unit Coordinates (3mvl.pdb1.gz) 58 Kb Biological Unit Coordinates (3mvl.pdb2.gz) 58 Kb LPC: Ligand-Protein Contacts for 3MVL CSU: Contacts of Structural Units for 3MVL Structure Factors (224 Kb) Retrieve 3MVL in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3MVL from S2C, [Save to disk] Re-refined 3mvl structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3MVL in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3MVL

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3MVL, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3mvl_A] [3mvl] [3mvl_B] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 3MVL: [S_TKc ] by SMART

Other resources with information on 3MVL

Community annotation for 3MVL at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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