3MXY	Protein Binding	date	May 08, 2010
title	Structures Of Grb2-Sh2 Domain And Aicd Peptide Complexes Rev Conformational Switch And Their Functional Implications.
authors	U.Sen, S.Das
compound		source
Molecule: Growth Factor Receptor-Bound Protein 2 Chain: A Synonym: Adapter Protein Grb2, Sh2sh3 Adapter Grb2, Protei Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Grb2, Ash Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21 (De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet(28a)
Molecule: Aicd Peptide E683v Variant Chain: L Engineered: Yes		Synthetic: Yes
symmetry	Space Group: P 61 2 2	R_factor 0.232 R_Free 0.252
crystal cell	length a length b length c angle alpha angle beta angle gamma 58.980 58.980 117.060 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	2.30 Å
ligand	PTR	enzyme
Primary reference	Functional Implications of the Conformational Switch in AICD Peptide upon Binding to Grb2-SH2 Domain., Das S, Raychaudhuri M, Sen U, Mukhopadhyay D, J Mol Biol. 2011 Oct 4. PMID:22001015

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (25 Kb) [Save to disk] Biological Unit Coordinates (3mxy.pdb1.gz) 21 Kb LPC: Ligand-Protein Contacts for 3MXY CSU: Contacts of Structural Units for 3MXY Structure Factors (48 Kb) Retrieve 3MXY in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3MXY from S2C, [Save to disk] Re-refined 3mxy structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3MXY in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3MXY

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3MXY, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3mxy_A] [3mxy_L] [3mxy] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 3MXY: [SH2 ] by SMART

Other resources with information on 3MXY

Community annotation for 3MXY at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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