3N23 Hydrolase date May 17, 2010
title Crystal Structure Of The High Affinity Complex Between Ouaba E2p Form Of The Sodium-Potassium Pump
authors L.Yatime, M.Laursen, J.P.Morth, M.Esmann, P.Nissen, N.U.Fedosova
compound source
Molecule: Sodiumpotassium-Transporting Atpase Subunit Alph
Chain: A, C
Fragment: Alpha Chain (Unp Residues 30-1021)
Synonym: Na(+)K(+) Atpase Alpha-1 Subunit, Sodium Pump Sub Alpha-1;
Ec: 3.6.3.9
Organism_scientific: Sus Scrofa
Organism_common: Pigs
Organism_taxid: 9823

Molecule: Sodiumpotassium-Transporting Atpase Subunit Beta
Chain: B, D
Fragment: Beta Chain (Unp Residues 27-303)
Synonym: Sodiumpotassium-Dependent Atpase Subunit Beta-1

Organism_scientific: Sus Scrofa
Organism_common: Pigs
Organism_taxid: 9823

Molecule: Na+K+ Atpase Gamma Subunit Transcript Variant A
Chain: G, E
Fragment: Gamma Chain (Unp Residues 17-47)

Organism_scientific: Sus Scrofa
Organism_common: Pigs
Organism_taxid: 9823
symmetry Space Group: P 21 21 21
R_factor 0.272 R_Free 0.302
crystal
cell
length a length b length c angle alpha angle beta angle gamma
117.160 118.930 494.100 90.00 90.00 90.00
method X-Ray Diffractionresolution 4.60 Å
ligand MG, OBN, PHD enzyme Hydrolase E.C.3.6.3.9 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, C


D, B
  • sodium ion export across pla...

  • G, E


    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (388 Kb) [Save to disk]
  • Biological Unit Coordinates (3n23.pdb1.gz) 194 Kb
  • Biological Unit Coordinates (3n23.pdb2.gz) 194 Kb
  • LPC: Ligand-Protein Contacts for 3N23
  • CSU: Contacts of Structural Units for 3N23
  • Structure Factors (316 Kb)
  • Retrieve 3N23 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3N23 from S2C, [Save to disk]
  • Re-refined 3n23 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3N23 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3N23
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3N23, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3n23] [3n23_G] [3n23_A] [3n23_C] [3n23_E] [3n23_D] [3n23_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 3N23: [Cation_ATPase_N ] by SMART
  • Other resources with information on 3N23
  • Community annotation for 3N23 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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