3ND0 Transport Protein date Jun 06, 2010
title X-Ray Crystal Structure Of A Slow Cyanobacterial Cl-H+ Anti
authors H.Jayaram, J.Robertson, F.Wu, C.Williams, C.Miller
compound source
Molecule: Sll0855 Protein
Chain: A, B
Engineered: Yes
 Organism_scientific: Synechocystis
Organism_taxid: 1148
Strain: Pcc 6803
Gene: Sll0855
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pask
symmetry Space Group: P 3 2 1
R_factor 0.243 R_Free 0.269
crystal
cell
length a length b length c angle alpha angle beta angle gamma
203.790 203.790 96.820 90.00 90.00 120.00
method X-Ray Diffractionresolution 3.20 Å
ligand CL enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B
  • voltage-gated chloride chann...
  • solute:proton antiporter act...


    • Primary referenceStructure of a Slow CLC Cl(-)/H(+) Antiporter from a Cyanobacterium., Jayaram H, Robertson JL, Wu F, Williams C, Miller C, Biochemistry. 2011 Jan 11. PMID:21174448
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (133 Kb) [Save to disk]
  • Biological Unit Coordinates (3nd0.pdb1.gz) 128 Kb
  • LPC: Ligand-Protein Contacts for 3ND0
  • CSU: Contacts of Structural Units for 3ND0
  • Structure Factors (554 Kb)
  • Retrieve 3ND0 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3ND0 from S2C, [Save to disk]
  • Re-refined 3nd0 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3ND0 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 3ND0
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3ND0, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3nd0_B] [3nd0] [3nd0_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 3ND0
  • Community annotation for 3ND0 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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