3NJ8 Oxidoreductase date Jun 17, 2010
title Crystal Structure Of T. Gondii Enoyl Acyl Carrier Protein Re With Bound Triclosan Like Inhibitor
authors S.P.Muench, S.N.Ruzheinikov, D.W.Rice
compound source
Molecule: Enoyl-Acyl Carrier Reductase
Chain: A, B
Fragment: Unp Residues 103-417
Ec: 1.3.1.9
Engineered: Yes
Organism_scientific: Toxoplasma Gondii
Organism_taxid: 5811
Strain: Rh
Gene: Enoyl Reductase, Enr
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21 Star (De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pmalcht
symmetry Space Group: P 32 2 1
R_factor 0.274 R_Free 0.322
crystal
cell
length a length b length c angle alpha angle beta angle gamma
78.256 78.256 189.077 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.70 Å
ligand NAD, NJ8 enzyme Oxidoreductase E.C.1.3.1.9 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceIdentification and development of novel inhibitors of Toxoplasma gondii enoyl reductase., Tipparaju SK, Muench SP, Mui EJ, Ruzheinikov SN, Lu JZ, Hutson SL, Kirisits MJ, Prigge ST, Roberts CW, Henriquez FL, Kozikowski AP, Rice DW, McLeod RL, J Med Chem. 2010 Sep 9;53(17):6287-300. PMID:20698542
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (94 Kb) [Save to disk]
  • Biological Unit Coordinates (3nj8.pdb1.gz) 174 Kb
  • LPC: Ligand-Protein Contacts for 3NJ8
  • CSU: Contacts of Structural Units for 3NJ8
  • Structure Factors (282 Kb)
  • Retrieve 3NJ8 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3NJ8 from S2C, [Save to disk]
  • Re-refined 3nj8 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3NJ8 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3NJ8
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3NJ8, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3nj8] [3nj8_A] [3nj8_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 3NJ8
  • Community annotation for 3NJ8 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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