3NKX	Protein Binding, Signaling Protein	date	Jun 21, 2010
title	Impaired Binding Of 14-3-3 To Raf1 Is Linked To Noonan And L Syndrome
authors	B.Schumacher, M.Weyand, C.Ottmann
compound		source
Molecule: 14-3-3 Protein Zetadelta Chain: A, B Synonym: Protein Kinase C Inhibitor Protein 1, Kcip-1 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Ywhaz Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21 Expression_system_vector_type: Plasmid
Molecule: Peptide Of Raf Proto-Oncogene Serinethreonine-Pr Kinase; Chain: P, Q Fragment: Phosphorylated C-Raf Peptide, Unp Residues 255-26 Synonym: Proto-Oncogene C-Raf, Craf, Raf-1 Ec: 2.7.11.1 Engineered: Yes		Synthetic: Yes Other_details: This Sequence Occurs Naturally In Humans.
symmetry	Space Group: P 21 21 21	R_factor 0.204 R_Free 0.247
crystal cell	length a length b length c angle alpha angle beta angle gamma 72.410 83.850 111.670 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.40 Å
ligand	PPI, SEP	enzyme	Transferase E.C.2.7.11.1 BRENDA
Gene Ontology	Chain Function Process Component A, B positive regulation of prote...
Primary reference	Impaired binding of 14-3-3 to C-RAF in Noonan Syndrome implies new approaches in diseases with increased Ras signaling., Molzan M, Schumacher B, Ottmann C, Baljuls A, Polzien L, Weyand M, Thiel P, Rose R, Rose M, Kuhenne P, Kaiser M, Rapp UR, Kuhlmann J, Ottmann C, Mol Cell Biol. 2010 Aug 2. PMID:20679480

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (84 Kb) [Save to disk] Biological Unit Coordinates (3nkx.pdb1.gz) 78 Kb LPC: Ligand-Protein Contacts for 3NKX CSU: Contacts of Structural Units for 3NKX Structure Factors (206 Kb) Retrieve 3NKX in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3NKX from S2C, [Save to disk] Re-refined 3nkx structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3NKX in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3NKX

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3NKX, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3nkx_B] [3nkx] [3nkx_P] [3nkx_A] [3nkx_Q] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 3NKX: [14_3_3 ] by SMART

Other resources with information on 3NKX

Community annotation for 3NKX at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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