3NLB Transferase Transferase Inhibitor date Jun 21, 2010
title Novel Kinase Profile Highlights The Temporal Basis Of Contex Dependent Checkpoint Pathways To Cell Death
authors A.J.Massey, J.Borgognoni, C.Bentley, N.Foloppe, A.Fiumana, L.Walm
compound source
Molecule: Serinethreonine-Protein Kinase Chk1
Chain: A
Fragment: N-Terminal Kinase Domain, Residues 1-289
Ec: 2.7.11.1
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Spodoptera Frugiperda
Expression_system_common: Fall Armyworm
Expression_system_taxid: 7108
Expression_system_strain: Sf9
Expression_system_vector_type: Baculovirus
Expression_system_plasmid: Pfastbac1chk1 1-289 C8h
symmetry Space Group: P 1 21 1
R_factor 0.181 R_Free 0.241
crystal
cell
length a length b length c angle alpha angle beta angle gamma
44.885 65.710 54.420 90.00 102.70 90.00
method X-Ray Diffractionresolution 1.90 Å
ligand 5BE enzyme Transferase E.C.2.7.11.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceContext-dependent cell cycle checkpoint abrogation by a novel kinase inhibitor., Massey AJ, Borgognoni J, Bentley C, Foloppe N, Fiumana A, Walmsley L, PLoS One. 2010 Oct 18;5(10):e13123. PMID:20976184
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (51 Kb) [Save to disk]
  • Biological Unit Coordinates (3nlb.pdb1.gz) 46 Kb
  • LPC: Ligand-Protein Contacts for 3NLB
  • CSU: Contacts of Structural Units for 3NLB
  • Structure Factors (174 Kb)
  • Retrieve 3NLB in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3NLB from S2C, [Save to disk]
  • Re-refined 3nlb structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3NLB in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3NLB
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3NLB, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3nlb] [3nlb_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 3NLB: [S_TKc ] by SMART
  • Other resources with information on 3NLB
  • Community annotation for 3NLB at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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