3NON Lyase date Jun 25, 2010
title Crystal Structure Of Isocyanide Hydratase From Pseudomonas F
authors M.Lakshminarasimhan, P.Madzelan, R.Nan, N.M.Milkovic, M.A.Wilson
compound source
Molecule: Isocyanide Hydratase
Chain: A, B
Ec: 4.2.1.103
Engineered: Yes
Organism_scientific: Pseudomonas Fluorescens
Organism_common: Bacterium Fluorescen
Organism_taxid: 294
Gene: Pfl_4109
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet15b
symmetry Space Group: P 1 21 1
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
56.576 56.466 68.233 90.00 112.49 90.00
method X-Ray Diffractionresolution 1.05 Å
ligand CSO, EDO enzyme Lyase E.C.4.2.1.103 BRENDA
Gene PFL
Primary referenceEvolution of new enzymatic function by structural modulation of cysteine reactivity in Pseudomonas fluorescens isocyanide hydratase., Lakshminarasimhan M, Madzelan P, Nan R, Milkovic NM, Wilson MA, J Biol Chem. 2010 Sep 17;285(38):29651-61. Epub 2010 Jul 14. PMID:20630867
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (180 Kb) [Save to disk]
  • Biological Unit Coordinates (3non.pdb1.gz) 176 Kb
  • LPC: Ligand-Protein Contacts for 3NON
  • CSU: Contacts of Structural Units for 3NON
  • Structure Factors (1450 Kb)
  • Retrieve 3NON in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3NON from S2C, [Save to disk]
  • Re-refined 3non structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3NON in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3NON
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3NON, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3non_A] [3non_B] [3non]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 3NON
  • Community annotation for 3NON at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science